Lineage for Protein: mono-domain cytidine deaminase

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 711877Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 711878Superfamily c.97.1: Cytidine deaminase-like [53927] (4 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 711879Family c.97.1.1: Cytidine deaminase [53928] (3 proteins)
    strand 5 is antiparallel to strand 4
  6. 711888Protein mono-domain cytidine deaminase [75327] (5 species)

Species:

  1. 711889Bacillus anthracis [TaxId:1392] [142829] (1 PDB entry)
  2. 711892Bacillus subtilis [TaxId:1423] [75328] (4 PDB entries)
    1. Domains for 1jtk:
      1. 711897Domain d1jtka_: 1jtk A: [71862]
      2. 711898Domain d1jtkb_: 1jtk B: [71863]
        complexed with thu, zn
    2. Domains for 1uwz:
      1. 711893Domain d1uwza_: 1uwz A: [108081]
      2. 711894Domain d1uwzb_: 1uwz B: [108082]
        complexed with thu, zn; mutant
    3. Domains for 1ux0:
      1. 711895Domain d1ux0a_: 1ux0 A: [108083]
      2. 711896Domain d1ux0b_: 1ux0 B: [108084]
        complexed with thu, zn; mutant
    4. Domains for 1ux1:
      1. 711899Domain d1ux1a_: 1ux1 A: [108085]
      2. 711900Domain d1ux1b_: 1ux1 B: [108086]
      3. 711901Domain d1ux1c_: 1ux1 C: [108087]
      4. 711902Domain d1ux1d_: 1ux1 D: [108088]
        complexed with thu, trs, zn; mutant
  3. 711903Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110764] (1 PDB entry)
  4. 711908Human (Homo sapiens) [TaxId:9606] [102711] (1 PDB entry)
  5. 711911Mouse (Mus musculus) [TaxId:10090] [142830] (3 PDB entries)
    1. Domains for 1zab:
      1. 711920Domain d1zaba1: 1zab A:10-146 [124818]
        complexed with so4, urd, zn
      2. 711921Domain d1zabb1: 1zab B:10-143 [124819]
        automatically matched to 1ZAB A:10-146
        complexed with so4, urd, zn
      3. 711922Domain d1zabc1: 1zab C:10-144 [124820]
        automatically matched to 1ZAB A:10-146
        complexed with so4, urd, zn
      4. 711923Domain d1zabd1: 1zab D:10-146 [124821]
        automatically matched to 1ZAB A:10-146
        complexed with so4, urd, zn
    2. Domains for 2fr5:
      1. 711912Domain d2fr5a1: 2fr5 A:11-146 [133965]
        automatically matched to 1ZAB A:10-146
        complexed with so4, tyu, zn
      2. 711913Domain d2fr5b1: 2fr5 B:11-144 [133966]
        automatically matched to 1ZAB A:10-146
        complexed with so4, tyu, zn
      3. 711914Domain d2fr5c1: 2fr5 C:10-143 [133967]
        automatically matched to 1ZAB A:10-146
        complexed with so4, tyu, zn
      4. 711915Domain d2fr5d1: 2fr5 D:11-146 [133968]
        automatically matched to 1ZAB A:10-146
        complexed with so4, tyu, zn
    3. Domains for 2fr6:
      1. 711916Domain d2fr6a1: 2fr6 A:10-146 [133969]
        automatically matched to 1ZAB A:10-146
        complexed with ctn, nh3, so4, uri, zn
      2. 711917Domain d2fr6b1: 2fr6 B:10-144 [133970]
        automatically matched to 1ZAB A:10-146
        complexed with ctn, nh3, so4, uri, zn
      3. 711918Domain d2fr6c1: 2fr6 C:10-142 [133971]
        automatically matched to 1ZAB A:10-146
        complexed with ctn, nh3, so4, uri, zn
      4. 711919Domain d2fr6d1: 2fr6 D:10-146 [133972]
        automatically matched to 1ZAB A:10-146
        complexed with ctn, nh3, so4, uri, zn

More info for Protein mono-domain cytidine deaminase from c.97.1.1: Cytidine deaminase

Timeline for Protein mono-domain cytidine deaminase from c.97.1.1: Cytidine deaminase: