SCOPe 2.08: Protein: Transcarbamylase-like protein

Lineage for Protein: Transcarbamylase-like protein

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.78: ATC-like [53670] (2 superfamilies)
consists of two similar domains related by pseudo dyad; duplication
core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
Superfamily c.78.1: Aspartate/ornithine carbamoyltransferase [53671] (2 families)
Family c.78.1.1: Aspartate/ornithine carbamoyltransferase [53672] (4 proteins)
Protein Transcarbamylase-like protein [75308] (1 species)

Species:

Bacteroides fragilis [TaxId:817] [75309] (4 PDB entries)
1. Domains for 1js1:
  1. Domain d1js1x1: 1js1 X:1-163 [71834]
    Other proteins in same PDB: d1js1x3, d1js1y3, d1js1z3
    complexed with po4
  2. Domain d1js1x2: 1js1 X:164-317 [71835]
    Other proteins in same PDB: d1js1x3, d1js1y3, d1js1z3
    complexed with po4
  3. Domain d1js1y1: 1js1 Y:1-163 [71836]
    Other proteins in same PDB: d1js1x3, d1js1y3, d1js1z3
    complexed with po4
  4. Domain d1js1y2: 1js1 Y:164-317 [71837]
    Other proteins in same PDB: d1js1x3, d1js1y3, d1js1z3
    complexed with po4
  5. Domain d1js1z1: 1js1 Z:1-163 [71838]
    Other proteins in same PDB: d1js1x3, d1js1y3, d1js1z3
    complexed with po4
  6. Domain d1js1z2: 1js1 Z:164-317 [71839]
    Other proteins in same PDB: d1js1x3, d1js1y3, d1js1z3
    complexed with po4
2. Domains for 2fg6:
  1. Domain d2fg6c1: 2fg6 C:1-163 [133402]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x1
    complexed with sn0, so4
  2. Domain d2fg6c2: 2fg6 C:164-318 [133403]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x2
    complexed with sn0, so4
  3. Domain d2fg6d1: 2fg6 D:1-163 [133404]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x1
    complexed with sn0, so4
  4. Domain d2fg6d2: 2fg6 D:164-318 [133405]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x2
    complexed with sn0, so4
  5. Domain d2fg6e1: 2fg6 E:1-163 [133406]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x1
    complexed with sn0, so4
  6. Domain d2fg6e2: 2fg6 E:164-318 [133407]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x2
    complexed with sn0, so4
  7. Domain d2fg6x1: 2fg6 X:1-163 [133408]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x1
    complexed with sn0, so4
  8. Domain d2fg6x2: 2fg6 X:164-318 [133409]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x2
    complexed with sn0, so4
  9. Domain d2fg6y1: 2fg6 Y:1-163 [133410]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x1
    complexed with sn0, so4
  10. Domain d2fg6y2: 2fg6 Y:164-318 [133411]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x2
    complexed with sn0, so4
  11. Domain d2fg6z1: 2fg6 Z:1-163 [133412]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x1
    complexed with sn0, so4
  12. Domain d2fg6z2: 2fg6 Z:164-318 [133413]
    Other proteins in same PDB: d2fg6c3, d2fg6d3, d2fg6e3, d2fg6x3, d2fg6y3, d2fg6z3
    automated match to d1js1x2
    complexed with sn0, so4
3. Domains for 2fg7:
  1. Domain d2fg7c1: 2fg7 C:1-163 [133414]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x1
    complexed with cp, sn0, so4
  2. Domain d2fg7c2: 2fg7 C:164-318 [133415]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x2
    complexed with cp, sn0, so4
  3. Domain d2fg7d1: 2fg7 D:1-163 [133416]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x1
    complexed with cp, sn0, so4
  4. Domain d2fg7d2: 2fg7 D:164-318 [133417]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x2
    complexed with cp, sn0, so4
  5. Domain d2fg7e1: 2fg7 E:1-163 [133418]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x1
    complexed with cp, sn0, so4
  6. Domain d2fg7e2: 2fg7 E:164-318 [133419]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x2
    complexed with cp, sn0, so4
  7. Domain d2fg7x1: 2fg7 X:1-163 [133420]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x1
    complexed with cp, sn0, so4
  8. Domain d2fg7x2: 2fg7 X:164-318 [133421]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x2
    complexed with cp, sn0, so4
  9. Domain d2fg7y1: 2fg7 Y:1-163 [133422]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x1
    complexed with cp, sn0, so4
  10. Domain d2fg7y2: 2fg7 Y:164-318 [133423]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x2
    complexed with cp, sn0, so4
  11. Domain d2fg7z1: 2fg7 Z:1-163 [133424]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x1
    complexed with cp, sn0, so4
  12. Domain d2fg7z2: 2fg7 Z:164-318 [133425]
    Other proteins in same PDB: d2fg7c3, d2fg7d3, d2fg7e3, d2fg7x3, d2fg7y3, d2fg7z3
    automated match to d1js1x2
    complexed with cp, sn0, so4
4. Domains for 2g7m:
  1. Domain d2g7mc1: 2g7m C:1-163 [204308]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x1
    complexed with an0, cp, so4; mutant
  2. Domain d2g7mc2: 2g7m C:164-318 [204309]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x2
    complexed with an0, cp, so4; mutant
  3. Domain d2g7md1: 2g7m D:1-163 [204310]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x1
    complexed with an0, cp, so4; mutant
  4. Domain d2g7md2: 2g7m D:164-318 [204311]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x2
    complexed with an0, cp, so4; mutant
  5. Domain d2g7me1: 2g7m E:1-163 [204312]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x1
    complexed with an0, cp, so4; mutant
  6. Domain d2g7me2: 2g7m E:164-318 [204313]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x2
    complexed with an0, cp, so4; mutant
  7. Domain d2g7mx1: 2g7m X:1-163 [204314]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x1
    complexed with an0, cp, so4; mutant
  8. Domain d2g7mx2: 2g7m X:164-318 [204315]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x2
    complexed with an0, cp, so4; mutant
  9. Domain d2g7my1: 2g7m Y:1-163 [204316]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x1
    complexed with an0, cp, so4; mutant
  10. Domain d2g7my2: 2g7m Y:164-318 [204317]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x2
    complexed with an0, cp, so4; mutant
  11. Domain d2g7mz1: 2g7m Z:1-163 [204318]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x1
    complexed with an0, cp, so4; mutant
  12. Domain d2g7mz2: 2g7m Z:164-318 [204319]
    Other proteins in same PDB: d2g7mc3, d2g7md3, d2g7me3, d2g7mx3, d2g7my3, d2g7mz3
    automated match to d1js1x2
    complexed with an0, cp, so4; mutant

More info for Protein Transcarbamylase-like protein from c.78.1.1: Aspartate/ornithine carbamoyltransferase

Timeline for Protein Transcarbamylase-like protein from c.78.1.1: Aspartate/ornithine carbamoyltransferase:

Protein Transcarbamylase-like protein from c.78.1.1: Aspartate/ornithine carbamoyltransferase first appeared in SCOP 1.61
Protein Transcarbamylase-like protein from c.78.1.1: Aspartate/ornithine carbamoyltransferase appears in SCOPe 2.07