SCOPe 2.06: Protein: 2-keto-3-deoxygluconate kinase

Lineage for Protein: 2-keto-3-deoxygluconate kinase

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.72: Ribokinase-like [53612] (3 superfamilies)
core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
potential superfamily: members of this fold have similar functions but different ATP-binding sites

Superfamily c.72.1: Ribokinase-like [53613] (6 families)
has extra strand located between strands 2 and 3
Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
automatically mapped to Pfam PF00294
Protein 2-keto-3-deoxygluconate kinase [75295] (2 species)

Species:

Thermotoga maritima, TM0067 [TaxId:2336] [75296] (2 PDB entries)
1. Domains for 1j5v:
  1. Domain d1j5va1: 1j5v A:1-330 [302533]
    Other proteins in same PDB: d1j5va2, d1j5vb2
    automated match to d2afbb_
    complexed with 2of, ni, ni1, ni3, of1, zn3
  2. Domain d1j5vb1: 1j5v B:1-330 [302535]
    Other proteins in same PDB: d1j5va2, d1j5vb2
    automated match to d2afbb_
    complexed with 2of, ni, ni1, ni3, of1, zn3
2. Domains for 2afb:
  1. Domain d2afba2: 2afb A:1-331 [126674]
    Other proteins in same PDB: d2afba3, d2afbb3
    automated match to d1j5va_
    complexed with ca, ni
  2. Domain d2afbb2: 2afb B:1-331 [126675]
    Other proteins in same PDB: d2afba3, d2afbb3
    automated match to d1j5va_
    complexed with ca, ni
Thermus thermophilus [TaxId:274] [102640] (4 PDB entries)
1. Domains for 1v19:
  1. Domain d1v19a_: 1v19 A: [100247]
    structural genomics
    complexed with dio
  2. Domain d1v19b_: 1v19 B: [100248]
    structural genomics
    complexed with dio
2. Domains for 1v1a:
  1. Domain d1v1aa_: 1v1a A: [100249]
    structural genomics
    complexed with adp, kdg
  2. Domain d1v1ab_: 1v1a B: [100250]
    structural genomics
    complexed with adp, kdg
3. Domains for 1v1b:
  1. Domain d1v1ba_: 1v1b A: [100251]
    structural genomics
    complexed with atp
  2. Domain d1v1bb_: 1v1b B: [100252]
    structural genomics
    complexed with atp
  3. Domain d1v1bc_: 1v1b C: [100253]
    structural genomics
    complexed with atp
  4. Domain d1v1bd_: 1v1b D: [100254]
    structural genomics
    complexed with atp
4. Domains for 1v1s:
  1. Domain d1v1sa_: 1v1s A: [100256]
    structural genomics
  2. Domain d1v1sb_: 1v1s B: [100257]
    structural genomics
  3. Domain d1v1sc_: 1v1s C: [100258]
    structural genomics
  4. Domain d1v1sd_: 1v1s D: [100259]
    structural genomics
  5. Domain d1v1se_: 1v1s E: [100260]
    structural genomics
  6. Domain d1v1sf_: 1v1s F: [100261]
    structural genomics

More info for Protein 2-keto-3-deoxygluconate kinase from c.72.1.1: Ribokinase-like

Timeline for Protein 2-keto-3-deoxygluconate kinase from c.72.1.1: Ribokinase-like:

Protein 2-keto-3-deoxygluconate kinase from c.72.1.1: Ribokinase-like first appeared in SCOP 1.61
Protein 2-keto-3-deoxygluconate kinase from c.72.1.1: Ribokinase-like appears in SCOPe 2.05
Protein 2-keto-3-deoxygluconate kinase from c.72.1.1: Ribokinase-like appears in SCOPe 2.07
Protein 2-keto-3-deoxygluconate kinase from c.72.1.1: Ribokinase-like appears in the current release, SCOPe 2.08