Lineage for Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150176Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase [75218] (5 protein domains)
    contains extra strand (3) in the parallel beta-sheet, order 321546

Protein Domains:

  1. 2150177Hypothetical tRNA/rRNA methyltransfease HI0766 (YibK homologue) [82374] (1 species)
  2. 2150181RlmB, C-terminal domain [82376] (1 species)
    23S rRNA G2251 2'O-methytransferase
  3. 2150191RrmA (RrmH), C-terminal domain [75219] (1 species)
    23S rRNA methyltransferase; proposed gene names are as appear in the original publication (and the PDB entry)
  4. 2150194tRNA (Gm18) methyltransferase TrmH [102279] (1 species)
  5. 2150197automated matches [191165] (2 species)
    not a true protein
    1. 2150198Species Escherichia coli [TaxId:364106] [226743] (1 PDB entry)
    2. 2150200Species Yersinia pestis [TaxId:214092] [189377] (2 PDB entries)

More info for Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase

Timeline for Family c.116.1.1: SpoU-like RNA 2'-O ribose methyltransferase: