Lineage for Protein: D-hydantoinase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2084338Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2084618Family c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain [75073] (5 protein domains)
    automatically mapped to Pfam PF13147
  6. 2084619Protein D-hydantoinase [75074] (4 species)

Species:

  1. 2084620Bacillus sp. AR9 [TaxId:301298] [141802] (1 PDB entry)
    Uniprot Q5DLU2 2-460
  2. 2084623Bacillus stearothermophilus [TaxId:1422] [75076] (1 PDB entry)
  3. 2084632Burkholderia pickettii [TaxId:329] [89488] (1 PDB entry)
  4. 2084637Thermus sp. [TaxId:275] [75075] (2 PDB entries)
    1. Domains for 1gkp:
      1. 2084638Domain d1gkpa2: 1gkp A:55-389 [70232]
        Other proteins in same PDB: d1gkpa1, d1gkpb1, d1gkpc1, d1gkpd1, d1gkpe1, d1gkpf1
        complexed with epe, so4, zn
      2. 2084639Domain d1gkpb2: 1gkp B:55-389 [70234]
        Other proteins in same PDB: d1gkpa1, d1gkpb1, d1gkpc1, d1gkpd1, d1gkpe1, d1gkpf1
        complexed with epe, so4, zn
      3. 2084640Domain d1gkpc2: 1gkp C:55-389 [70236]
        Other proteins in same PDB: d1gkpa1, d1gkpb1, d1gkpc1, d1gkpd1, d1gkpe1, d1gkpf1
        complexed with epe, so4, zn
      4. 2084641Domain d1gkpd2: 1gkp D:55-389 [70238]
        Other proteins in same PDB: d1gkpa1, d1gkpb1, d1gkpc1, d1gkpd1, d1gkpe1, d1gkpf1
        complexed with epe, so4, zn
      5. 2084642Domain d1gkpe2: 1gkp E:55-389 [70240]
        Other proteins in same PDB: d1gkpa1, d1gkpb1, d1gkpc1, d1gkpd1, d1gkpe1, d1gkpf1
        complexed with epe, so4, zn
      6. 2084643Domain d1gkpf2: 1gkp F:55-389 [70242]
        Other proteins in same PDB: d1gkpa1, d1gkpb1, d1gkpc1, d1gkpd1, d1gkpe1, d1gkpf1
        complexed with epe, so4, zn
    2. Domains for 1gkq:
      1. 2084644Domain d1gkqa2: 1gkq A:55-389 [70244]
        Other proteins in same PDB: d1gkqa1, d1gkqb1, d1gkqc1, d1gkqd1
        complexed with zn
      2. 2084645Domain d1gkqb2: 1gkq B:55-389 [70246]
        Other proteins in same PDB: d1gkqa1, d1gkqb1, d1gkqc1, d1gkqd1
        complexed with zn
      3. 2084646Domain d1gkqc2: 1gkq C:55-389 [70248]
        Other proteins in same PDB: d1gkqa1, d1gkqb1, d1gkqc1, d1gkqd1
        complexed with zn
      4. 2084647Domain d1gkqd2: 1gkq D:55-389 [70250]
        Other proteins in same PDB: d1gkqa1, d1gkqb1, d1gkqc1, d1gkqd1
        complexed with zn

More info for Protein D-hydantoinase from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain

Timeline for Protein D-hydantoinase from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain: