Lineage for Species: Transmissible gastroenteritis virus [TaxId: 11149]

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 670182Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 670183Superfamily b.47.1: Trypsin-like serine proteases [50494] (4 families) (S)
  5. 671623Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (3 proteins)
  6. 671648Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (3 species)
    contains an extra alpha-helical domain
  7. 671664Species Transmissible gastroenteritis virus [TaxId:11149] [74980] (3 PDB entries)

PDB entries in Species: Transmissible gastroenteritis virus [TaxId: 11149]:

  1. Domain(s) for 1lvo:
    1. 671665Domain d1lvoa_: 1lvo A: [74284]
    2. 671666Domain d1lvob_: 1lvo B: [74285]
    3. 671667Domain d1lvoc_: 1lvo C: [74286]
    4. 671668Domain d1lvod_: 1lvo D: [74287]
    5. 671669Domain d1lvoe_: 1lvo E: [74288]
    6. 671670Domain d1lvof_: 1lvo F: [74289]
      complexed with dox, mpd, so4
  2. Domain(s) for 1p9u:
    1. 671671Domain d1p9ua_: 1p9u A: [88001]
    2. 671672Domain d1p9ub_: 1p9u B: [88002]
    3. 671673Domain d1p9uc_: 1p9u C: [88003]
    4. 671674Domain d1p9ud_: 1p9u D: [88004]
    5. 671675Domain d1p9ue_: 1p9u E: [88005]
    6. 671676Domain d1p9uf_: 1p9u F: [88006]
      complexed with ch2, mpd, so4
  3. Domain(s) for 2amp:
    1. 671677Domain d2ampa1: 2amp A:1-299 [127021]
      automatically matched to d1lvod_
      complexed with i12
    2. 671678Domain d2ampb1: 2amp B:1-299 [127022]
      automatically matched to d1lvod_
      complexed with i12

More info for Species Transmissible gastroenteritis virus [TaxId:11149] from b.47.1.4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2)

Timeline for Species Transmissible gastroenteritis virus [TaxId:11149] from b.47.1.4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2):