Lineage for Protein: Initiation factor eIF2 gamma subunit

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2054994Fold b.44: Elongation factor/aminomethyltransferase common domain [50464] (2 superfamilies)
    barrel, closed; n=6, S=10; greek-key
  4. 2054995Superfamily b.44.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain [50465] (2 families) (S)
    probably related to the second domain and its superfamiy by a circular permutation
  5. 2054996Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain [50466] (7 protein domains)
  6. 2055069Protein Initiation factor eIF2 gamma subunit [74964] (3 species)

Species:

  1. 2055070Methanococcus jannaschii [TaxId:2190] [101789] (1 PDB entry)
  2. 2055072Pyrococcus abyssi [TaxId:29292] [74965] (5 PDB entries)
    1. Domain for 1kjz:
    2. Domain for 1kk0:
    3. Domain for 1kk1:
    4. Domain for 1kk2:
    5. Domain for 1kk3:
  3. 2055078Sulfolobus solfataricus [TaxId:2287] [141344] (10 PDB entries)
    Uniprot Q980A5 321-415
    1. Domain for 2aho:
    2. Domain for 2plf:
    3. Domains for 2pmd:
      1. 2055083Domain d2pmda2: 2pmd A:321-415 [149664]
        Other proteins in same PDB: d2pmda1, d2pmda3, d2pmdb1, d2pmdb3
        automated match to d2qn6a2
        complexed with gdp, gnp, ppv
      2. 2055084Domain d2pmdb2: 2pmd B:321-415 [149667]
        Other proteins in same PDB: d2pmda1, d2pmda3, d2pmdb1, d2pmdb3
        automated match to d2qn6a2
        complexed with gdp, gnp, ppv
    4. Domain for 2qmu:
    5. Domain for 2qn6:
    6. Domains for 3i1f:
      1. 2055085Domain d3i1fa3: 3i1f A:321-415 [246642]
        Other proteins in same PDB: d3i1fa1, d3i1fa2, d3i1fb1, d3i1fb2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gcp, po4
      2. 2055086Domain d3i1fb3: 3i1f B:321-415 [246645]
        Other proteins in same PDB: d3i1fa1, d3i1fa2, d3i1fb1, d3i1fb2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gcp, po4
    7. Domains for 4m0l:
      1. 2055088Domain d4m0la3: 4m0l A:321-415 [253710]
        Other proteins in same PDB: d4m0la1, d4m0la2, d4m0lb1, d4m0lb2, d4m0lc1, d4m0lc2, d4m0ld1, d4m0ld2, d4m0le1, d4m0le2, d4m0lf1, d4m0lf2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gdp, mg, po4
      2. 2055089Domain d4m0lb3: 4m0l B:321-415 [253713]
        Other proteins in same PDB: d4m0la1, d4m0la2, d4m0lb1, d4m0lb2, d4m0lc1, d4m0lc2, d4m0ld1, d4m0ld2, d4m0le1, d4m0le2, d4m0lf1, d4m0lf2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gdp, mg, po4
      3. 2055090Domain d4m0lc3: 4m0l C:321-415 [253716]
        Other proteins in same PDB: d4m0la1, d4m0la2, d4m0lb1, d4m0lb2, d4m0lc1, d4m0lc2, d4m0ld1, d4m0ld2, d4m0le1, d4m0le2, d4m0lf1, d4m0lf2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gdp, mg, po4
      4. 2055091Domain d4m0ld3: 4m0l D:321-415 [253719]
        Other proteins in same PDB: d4m0la1, d4m0la2, d4m0lb1, d4m0lb2, d4m0lc1, d4m0lc2, d4m0ld1, d4m0ld2, d4m0le1, d4m0le2, d4m0lf1, d4m0lf2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gdp, mg, po4
      5. 2055092Domain d4m0le3: 4m0l E:321-415 [253722]
        Other proteins in same PDB: d4m0la1, d4m0la2, d4m0lb1, d4m0lb2, d4m0lc1, d4m0lc2, d4m0ld1, d4m0ld2, d4m0le1, d4m0le2, d4m0lf1, d4m0lf2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gdp, mg, po4
      6. 2055093Domain d4m0lf3: 4m0l F:321-415 [253725]
        Other proteins in same PDB: d4m0la1, d4m0la2, d4m0lb1, d4m0lb2, d4m0lc1, d4m0lc2, d4m0ld1, d4m0ld2, d4m0le1, d4m0le2, d4m0lf1, d4m0lf2
        automated match to d2qn6a2
        protein/RNA complex; complexed with gdp, mg, po4
    8. Domain for 4m2l:
    9. Domain for 4m4s:
    10. Domain for 4m53:

More info for Protein Initiation factor eIF2 gamma subunit from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain

Timeline for Protein Initiation factor eIF2 gamma subunit from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain:

  • Protein Initiation factor eIF2 gamma subunit from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain first appeared in SCOP 1.61
  • Protein Initiation factor eIF2 gamma subunit from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in SCOPe 2.05