SCOPe 2.05: Domain d1lkzb1: 1lkz B:1-126,B:199-219

Lineage for d1lkzb1 (1lkz B:1-126,B:199-219)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.124: NagB/RpiA/CoA transferase-like [100949] (1 superfamily)
   core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456

4. Superfamily c.124.1: NagB/RpiA/CoA transferase-like [100950] (9 families)

5. Family c.124.1.4: D-ribose-5-phosphate isomerase (RpiA), catalytic domain [75176] (1 protein)
   share a common phosphate-binding site with the NagB-like family; part of sheet is folded upon itself and forms a barrel-like structure like the CoA transferase subunits

6. Protein D-ribose-5-phosphate isomerase (RpiA), catalytic domain [75177] (4 species)

7. Species Escherichia coli [TaxId:562] [75178] (3 PDB entries)

8. Domain d1lkzb1: 1lkz B:1-126,B:199-219 [73993]
   Other proteins in same PDB: d1lkza2, d1lkzb2

Details for d1lkzb1

PDB Entry: 1lkz, 2.5 Å

PDB Description: crystal structure of d-ribose-5-phosphate isomerase (rpia) from escherichia coli.

PDB Compounds: (B:) Ribose 5-phosphate isomerase A

SCOPe Domain Sequences for d1lkzb1:

Sequence; same for both SEQRES and ATOM records:

>d1lkzb1 c.124.1.4 (B:1-126,B:199-219) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Escherichia coli [TaxId: 562]}
mtqdelkkavgwaalqyvqpgtivgvgtgstaahfidalgtmkgqiegavsssdastekl
kslgihvfdlnevdslgiyvdgadeinghmqmikgggaaltrekiiasvaekficiadas
kqvdilXanrgadvaligtpdgvktivk

Timeline for d1lkzb1:

• d1lkzb1 first appeared in SCOP 1.61
  
• d1lkzb1 appears in SCOPe 2.04
  
• d1lkzb1 appears in SCOPe 2.06
  
• d1lkzb1 appears in the current release, SCOPe 2.08