SCOPe 2.05: Domain d1lb4a_: 1lb4 A:

Lineage for d1lb4a_ (1lb4 A:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.8: TRAF domain-like [49598] (1 superfamily)
   sandwich; 8 strands in 2 sheets; greek-key

4. Superfamily b.8.1: TRAF domain-like [49599] (3 families)
   has a circularly permuted immunoglobulin-fold topology with extra strand

5. Family b.8.1.1: MATH domain [49600] (5 proteins)
   automatically mapped to Pfam PF00917

6. Protein TNF receptor associated factor 6 (TRAF6) [74883] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [74884] (3 PDB entries)

8. Domain d1lb4a_: 1lb4 A: [73796]

Details for d1lb4a_

PDB Entry: 1lb4, 2.4 Å

PDB Description: traf6 apo structure

PDB Compounds: (A:) TNF receptor-associated factor 6

SCOPe Domain Sequences for d1lb4a_:

Sequence, based on SEQRES records:

>d1lb4a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]}
qcngiyiwkignfgmhlkcqeeekpvvihspgfytgkpgyklcmrlhlqlptaqrcanyi
slfvhtmqgeydshlpwpfqgtirltildqseapvrqnheeimdakpellafqrptiprn
pkgfgyvtfmhlealrqrtfikddtllvrcevstrfdle

Sequence, based on observed residues (ATOM records):

>d1lb4a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]}
qcngiyiwkignfgmhlkcqeeekpvvihspgfytgkpgyklcmrlhlqlptaqrcanyi
slfvhtmqgeydshlpwpfqgtirltildqseapvrqnheeimdakpellafqrptikgf
gyvtfmhlealrqrtfikddtllvrcevstrfdle

Timeline for d1lb4a_:

• d1lb4a_ first appeared in SCOP 1.61
  
• d1lb4a_ appears in SCOPe 2.04
  
• d1lb4a_ is called d1lb4a1 in SCOPe 2.06
  
• d1lb4a_ appears in the current release, SCOPe 2.08, called d1lb4a1