SCOP 1.61: Domain d1l9zd_: 1l9z D:

Lineage for d1l9zd_ (1l9z D:)

1. Root: SCOP 1.61

2. Class i: Low resolution protein structures [58117] (17 folds)

3. Fold i.8: RNA polymerase [58180] (1 superfamily)

4. Superfamily i.8.1: RNA polymerase [58181] (1 family)

5. Family i.8.1.1: RNA polymerase [58182] (1 protein)

6. Protein DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits [58183] (1 species)

7. Species Thermus aquaticus [TaxId:271] [58184] (3 PDB entries)

8. Domain d1l9zd_: 1l9z D: [73769]

Details for d1l9zd_

PDB Entry: 1l9z, 6.5 Å

PDB Description: Thermus aquaticus RNA Polymerase Holoenzyme/Fork-Junction Promoter DNA Complex at 6.5 A Resolution

SCOP Domain Sequences for d1l9zd_:

Sequence, based on SEQRES records:

>d1l9zd_ i.8.1.1 (D:) DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits {Thermus aquaticus}
kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgk
ykrqrfegkvcercgvevtrsivrryrmghielatpaahiwfvkdvpskigtlldlsate
leqvlyfnkyivldpkgavldgvpvekrqlltdeeyrelrygkqetyplpagvdalvkdg
eevvkgqelapgvvsrmdgvalyrfprrvrvdylrkeraalriplsawvekeayrpgevl
aelsepylfraeesgvvelkdlaeghliylrqeeevvaryflpagmtplvvegeivevgq
plaegkgllrlprhmtakeveaeeegdsvhltlflewtepkdykvaphmnvivpegakvq
agekivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevttgdrvapgdvla
dggkvkseiygrvevdlvrnvvrvvesydidarmgaeaiqellkeldleklerelleemk
hpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdlnd
lyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdavidngrrgspvtnpgserplrs
ltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkme
ekafapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlve
gqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakps
rdiilglyyitqvrkekkgagmafatpeealaayergevalnapivvagretsvgrlkfv
fanpdeallavahglldlqdvvtvrylgrrletspgrilfarivgeavgdekvaqeliqm
dvpqeknslkdlvyqaflrlgmektarlldalkyygftlsttsgitigiddavipeekqr
yleeadrklrqieqayemgfltdrerydqviqlwtettekvtqavfknfeenypfnplyv
maqsgargnpqqirqlcgmrglmqkpsgetfevpvrssfregltvleyfisshgarkgga
dtalrtadsgyltrklvdvaheivvreadcgttnyisvplfqmdevtrtlrlrkrsdies
glygrvlarevealgrrleegrylsledvhflikaaeagevrevpvrspltcqtrygvcq
kcygydlsmarpvsigeavgvvaaesigepgtqltmrtfhtggvavgtditqglprviel
fearrpkakaviseidgvvrieegedrlsvfvesegfskeyklpkdarllvkdgdyveag
qpltrgaidphqlleakgpeaverylvdeiqkvyraqgvklhdkhieivvrqmlkyvevt
dpgdsrllegqvlekwdvealnerliaegkvpvawkpllmgvtksalstkswlsaasfqn
tthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqrtlkaieear

Sequence, based on observed residues (ATOM records):

>d1l9zd_ i.8.1.1 (D:) DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits {Thermus aquaticus}
kevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacgk
ykrqrfegkvcercgvevtrsivrryrmghielatpaahiwfvkdvpskigtlldlsate
leqvlyfnkyivldpkgavldgvpvekrqlltdeedarmgaeaiqellkeldleklerel
leemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfat
sdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdavidngrrgspvtnpgse
rplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfl
lkkmeekafapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafq
pvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgep
lakpsrdiilglyyitqvrkekkgagmafatpeealaayergevalnapivvagretsvg
rlkfvfanpdeallavahglldlqdvvtvrylgrrletspgrilfarivgeavgdekvaq
eliqmdvpqeknslkdlvyqaflrlgmektarlldalkyygftlsttsgitigiddavip
eekqryleeadrklrqieqayemgfltdrerydqviqlwtettekvtqavfknfeenypf
nplyvmaqsgargnpqqirqlcgmrglmqkpsgetfevpvrssfregltvleyfisshga
rkggadtalrtadsgyltrklvdvaheivvreadcgttnyisvplfqmdevtrtlrlrkr
sdiesglygrvlarevealgrrleegrylsledvhflikaaeagevrevpvrspltcqtr
ygvcqkcygydlsmarpvsigeavgvvaaesigepgtqltmrtprvielfearrpkakav
iseidgvvrieegedrlsvfvesegfskeyklpkdarllvkdgdyveagqpltrgaidph
qlleakgpeaverylvdeiqkvyraqgvklhdkhieivvrqmlkyvevtdpgdsrllegq
vlekwdvealnerliavpvawkpllmgvtksalstkswlsaasfqntthvlteaaiagkk
deliglkenvilgrlipagtgsdfvrftqvvdqrtlkaieear

Timeline for d1l9zd_:

• d1l9zd_ is new in SCOP 1.61
  
• d1l9zd_ appears in SCOP 1.63
  
• d1l9zd_ appears in the current release, SCOPe 2.08