Lineage for d1l6na1 (1l6n A:2-130)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1999823Fold a.61: Retroviral matrix proteins [47835] (1 superfamily)
    4-5 helices; right-handed superhelix
  4. 1999824Superfamily a.61.1: Retroviral matrix proteins [47836] (6 families) (S)
    the 5th, C-terminal helix is missing in some of the member structures
  5. 1999825Family a.61.1.1: Immunodeficiency virus matrix proteins [47837] (3 protein domains)
    automatically mapped to Pfam PF00540
  6. 1999826Protein HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) [47838] (1 species)
    topologically similar to one subunit in the interferon-gamma intertwined dimer
  7. 1999827Species Human immunodeficiency virus type 1 [TaxId:11676] [47839] (10 PDB entries)
  8. 1999839Domain d1l6na1: 1l6n A:2-130 [73624]
    Other proteins in same PDB: d1l6na2, d1l6na3

Details for d1l6na1

PDB Entry: 1l6n (more details)

PDB Description: structure of the n-terminal 283-residue fragment of the hiv-1 gag polyprotein
PDB Compounds: (A:) gag polyprotein

SCOPe Domain Sequences for d1l6na1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1l6na1 a.61.1.1 (A:2-130) HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) {Human immunodeficiency virus type 1 [TaxId: 11676]}

SCOPe Domain Coordinates for d1l6na1:

Click to download the PDB-style file with coordinates for d1l6na1.
(The format of our PDB-style files is described here.)

Timeline for d1l6na1: