SCOPe 2.05: Domain d1kyha_: 1kyh A:

Lineage for d1kyha_ (1kyh A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.4: YjeF C-terminal domain-like [75292] (3 proteins)
   automatically mapped to Pfam PF01256

6. Protein Hypothetical protein YxkO [75293] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [75294] (1 PDB entry)

8. Domain d1kyha_: 1kyh A: [73222]
   structural genomics

Details for d1kyha_

PDB Entry: 1kyh, 1.6 Å

PDB Description: structure of bacillus subtilis yxko, a member of the upf0031 family and a putative kinase

PDB Compounds: (A:) Hypothetical 29.9 kDa protein in SIGY-CYDD intergenic region

SCOPe Domain Sequences for d1kyha_:

Sequence, based on SEQRES records:

>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]}
nvpfwteehvratlperdaeshkgtygtalllagsddmpgaallaglgamrsglgklvig
tsenviplivpvlpeatywrdgwkkaadaqleetyraiaigpglpqtesvqqavdhvlta
dcpvildagalakrtypkregpviltphpgeffrmtgvpvnelqkkraeyakewaaqlqt
vivlkgnqtviafpdgdcwlnptgngalakggtgdtltgmilgmlcchedpkhavlnavy
lhgacaelwtdehsahtllahelsdilprvwkrfe

Sequence, based on observed residues (ATOM records):

>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]}
nvpfwteehvratlpertygtalllagsddmpgaallaglgamrsglgklvigtsenvip
livpvlpeatywrdgwkkaadaqleetyraiaigpglpqtesvqqavdhvltadcpvild
agalakrtypkregpviltphpgeffrmtgvpvnelqkkraeyakewaaqlqtvivlkgn
qtviafpdgdcwlnptgngalakggtgdtltgmilgmlcchedpkhavlnavylhgacae
lwtdehsahtllahelsdilprvwkrfe

Timeline for d1kyha_:

• d1kyha_ first appeared in SCOP 1.61
  
• d1kyha_ appears in SCOPe 2.04
  
• d1kyha_ appears in SCOPe 2.06
  
• d1kyha_ appears in the current release, SCOPe 2.08