SCOPe 2.06: Domain d1kbia1: 1kbi A:98-511

Lineage for d1kbia1 (1kbi A:98-511)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Flavocytochrome b2, C-terminal domain [51408] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51409] (11 PDB entries)
   Uniprot P00175
   N-terminal domain homologous to cytochrome b5

8. Domain d1kbia1: 1kbi A:98-511 [72277]
   Other proteins in same PDB: d1kbia2
   complexed with fmn, hem, mpd, po4, pyr

Details for d1kbia1

PDB Entry: 1kbi, 2.3 Å

PDB Description: Crystallographic Study of the Recombinant Flavin-binding Domain of Baker's Yeast Flavocytochrome b2: Comparison with the Intact Wild-type Enzyme

PDB Compounds: (A:) Cytochrome b2

SCOPe Domain Sequences for d1kbia1:

Sequence, based on SEQRES records:

>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsntkagpkamkktnveesqgasralskfidpsltwkdiee
lkkktklpivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileq
rnlkdklevfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrde
iemsmrllgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

Sequence, based on observed residues (ATOM records):

>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsntkktnveesqgasralskfidpsltwkdieelkkktkl
pivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileqrnlkdkl
evfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrdeiemsmrl
lgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

Timeline for d1kbia1:

• d1kbia1 first appeared in SCOP 1.61
  
• d1kbia1 appears in SCOPe 2.05
  
• d1kbia1 appears in SCOPe 2.07
  
• d1kbia1 appears in the current release, SCOPe 2.08