Lineage for d1kbia1 (1kbi A:98-511)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080000Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) (S)
  5. 2080001Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 protein domains)
  6. 2080236Protein Flavocytochrome b2, C-terminal domain [51408] (1 species)
  7. 2080237Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51409] (11 PDB entries)
    Uniprot P00175
    N-terminal domain homologous to cytochrome b5
  8. 2080238Domain d1kbia1: 1kbi A:98-511 [72277]
    Other proteins in same PDB: d1kbia2
    complexed with fmn, hem, mpd, po4, pyr

Details for d1kbia1

PDB Entry: 1kbi (more details), 2.3 Å

PDB Description: Crystallographic Study of the Recombinant Flavin-binding Domain of Baker's Yeast Flavocytochrome b2: Comparison with the Intact Wild-type Enzyme
PDB Compounds: (A:) Cytochrome b2

SCOPe Domain Sequences for d1kbia1:

Sequence, based on SEQRES records: (download)

>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsntkagpkamkktnveesqgasralskfidpsltwkdiee
lkkktklpivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileq
rnlkdklevfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrde
iemsmrllgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

Sequence, based on observed residues (ATOM records): (download)

>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
apgetkediarkeqlksllppldniinlydfeylasqtltkqawayyssgandevthren
hnayhriffkpkilvdvrkvdistdmlgshvdvpfyvsatalcklgnplegekdvargcg
qgvtkvpqmistlascspeeiieaapsdkqiqwyqlyvnsdrkitddlvknveklgvkal
fvtvdapslgqrekdmklkfsntkktnveesqgasralskfidpsltwkdieelkkktkl
pivikgvqrtedvikaaeigvsgvvlsnhggrqldfsrapievlaetmpileqrnlkdkl
evfvdggvrrgtdvlkalclgakgvglgrpflyanscygrngvekaieilrdeiemsmrl
lgvtsiaelkpdlldlstlkartvgvpndvlynevyegptltefeda

SCOPe Domain Coordinates for d1kbia1:

Click to download the PDB-style file with coordinates for d1kbia1.
(The format of our PDB-style files is described here.)

Timeline for d1kbia1:

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Domains from same chain:
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d1kbia2
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Domains from other chains:
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d1kbib_