Lineage for d1k6ql1 (1k6q L:1-107)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 452039Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (162 PDB entries)
  8. 452149Domain d1k6ql1: 1k6q L:1-107 [72094]
    Other proteins in same PDB: d1k6qh1, d1k6qh2, d1k6ql2
    part of anti-human tissue factor Fab D3

Details for d1k6ql1

PDB Entry: 1k6q (more details), 2.4 Å

PDB Description: Crystal structure of antibody Fab fragment D3

SCOP Domain Sequences for d1k6ql1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1k6ql1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
dikmtqspssmsaslgesvtitckasrdiksylswyqqkpwkspktliyyatsladgvps
rfsgsgsgqdysltisslesddtatyyclqhgespftfgsgtklelk

SCOP Domain Coordinates for d1k6ql1:

Click to download the PDB-style file with coordinates for d1k6ql1.
(The format of our PDB-style files is described here.)

Timeline for d1k6ql1:

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Domains from same chain:
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d1k6ql2