Lineage for d1k3rb2 (1k3r B:1-92,B:164-264)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150204Family c.116.1.2: Hypothetical protein MTH1 (MT0001), dimerisation domain [75221] (1 protein)
    contains extra strand (3) in the parallel beta-sheet, order 321546; interrupted by an insert OB-fold domain
  6. 2150205Protein Hypothetical protein MTH1 (MT0001), dimerisation domain [75222] (1 species)
  7. 2150206Species Methanobacterium thermoautotrophicum [TaxId:145262] [75223] (1 PDB entry)
  8. 2150208Domain d1k3rb2: 1k3r B:1-92,B:164-264 [72021]
    Other proteins in same PDB: d1k3ra1, d1k3rb1

Details for d1k3rb2

PDB Entry: 1k3r (more details), 2.3 Å

PDB Description: Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum
PDB Compounds: (B:) conserved protein MT0001

SCOPe Domain Sequences for d1k3rb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1k3rb2 c.116.1.2 (B:1-92,B:164-264) Hypothetical protein MTH1 (MT0001), dimerisation domain {Methanobacterium thermoautotrophicum [TaxId: 145262]}

SCOPe Domain Coordinates for d1k3rb2:

Click to download the PDB-style file with coordinates for d1k3rb2.
(The format of our PDB-style files is described here.)

Timeline for d1k3rb2:

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