Lineage for d1k1db2 (1k1d B:53-384)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2084338Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2084618Family c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain [75073] (5 protein domains)
    automatically mapped to Pfam PF13147
  6. 2084619Protein D-hydantoinase [75074] (4 species)
  7. 2084623Species Bacillus stearothermophilus [TaxId:1422] [75076] (1 PDB entry)
  8. 2084625Domain d1k1db2: 1k1d B:53-384 [71982]
    Other proteins in same PDB: d1k1da1, d1k1db1, d1k1dc1, d1k1dd1, d1k1de1, d1k1df1, d1k1dg1, d1k1dh1
    complexed with zn

Details for d1k1db2

PDB Entry: 1k1d (more details), 3.01 Å

PDB Description: Crystal structure of D-hydantoinase
PDB Compounds: (B:) D-hydantoinase

SCOPe Domain Sequences for d1k1db2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1k1db2 c.1.9.6 (B:53-384) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]}

SCOPe Domain Coordinates for d1k1db2:

Click to download the PDB-style file with coordinates for d1k1db2.
(The format of our PDB-style files is described here.)

Timeline for d1k1db2: