SCOPe 2.08: Domain d1jrga_: 1jrg A:

Lineage for d1jrga_ (1jrg A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.1: Pectin lyase-like [51126] (12 families)
   superhelix turns are made of 3 strands each

5. Family b.80.1.1: Pectate lyase-like [51127] (3 proteins)
   this is a repeat family; one repeat unit is 1pxz A:227-250 found in domain

6. Protein Pectate lyase [51128] (5 species)

7. Species Erwinia chrysanthemi, type A [TaxId:556] [75024] (4 PDB entries)

8. Domain d1jrga_: 1jrg A: [71825]
   complexed with so4

Details for d1jrga_

PDB Entry: 1jrg, 2.1 Å

PDB Description: crystal structure of the r3 form of pectate lyase a, erwinia chrysanthemi

PDB Compounds: (A:) pectate lyase

SCOPe Domain Sequences for d1jrga_:

Sequence, based on SEQRES records:

>d1jrga_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]}
aelvsdkalesaptvgwasqngfttggaaatsdniyivtniseftsalsagaeakiiqik
gtidisggtpytdfadqkarsqinipanttviglgtdakfingsliidgtdgtnnviirn
vyiqtpidvephyekgdgwnaewdamnitngahhvwidhvtisdgnftddmyttkdgety
vqhdgaldikrgsdyvtisnslidqhdktmlighndtnsaqdkgklhvtlfnnvfnrvte
raprvrygsihsfnnvfkgdakdpvyryqysfgigtsgsvlsegnsftianlsaskackv
vkkfngsifsdngsvlngsavdlsgcgfsaytskipyiydvqpmttelaqsitdnagsgk
l

Sequence, based on observed residues (ATOM records):

>d1jrga_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]}
aelvsdkalesaptvgwasqngfttggaaatsdniyivtniseftsalsagaeakiiqik
gtidisggtpytdfadqkarsqinipanttviglgtdakfingsliidgtdgtnnviirn
vyiqtpidvephyekgdgwnaewdamnitngahhvwidhvtisdgnftddmyttkdgety
vqhdgaldikrgsdyvtisnslidqhdktmlighdkgklhvtlfnnvfnrvteraprvry
gsihsfnnvfkgdakdpvyryqysfgigtsgsvlsegnsftianlsaskackvvkkfngs
ifsdngsvlngsavdlsgcgfsaytskipyiydvqpmttelaqsitdnagsgkl

Timeline for d1jrga_:

• d1jrga_ first appeared in SCOP 1.61
  
• d1jrga_ appears in SCOPe 2.07