Lineage for d1j8hb1 (1j8h B:93-190)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2022117Protein Class II MHC beta chain, C-terminal domain [88625] (6 species)
  7. 2022125Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88628] (40 PDB entries)
    Uniprot P04229 30-219
    probably orthologous to the mouse I-E group
  8. 2022141Domain d1j8hb1: 1j8h B:93-190 [71604]
    Other proteins in same PDB: d1j8ha1, d1j8ha2, d1j8hb2, d1j8hd1, d1j8hd2, d1j8he1, d1j8he2
    complexed with nag, ndg

Details for d1j8hb1

PDB Entry: 1j8h (more details), 2.4 Å

PDB Description: Crystal Structure of a Complex of a Human alpha/beta-T cell Receptor, Influenza HA Antigen Peptide, and MHC Class II Molecule, HLA-DR4
PDB Compounds: (B:) hla class II histocompatibility antigen, dr-4 beta chain

SCOPe Domain Sequences for d1j8hb1:

Sequence, based on SEQRES records: (download)

>d1j8hb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DR group [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d1j8hb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DR group [TaxId: 9606]}

SCOPe Domain Coordinates for d1j8hb1:

Click to download the PDB-style file with coordinates for d1j8hb1.
(The format of our PDB-style files is described here.)

Timeline for d1j8hb1: