Lineage for d1ipjc1 (1ipj C:9-177)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070015Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 2070093Family b.82.1.2: Germin/Seed storage 7S protein [51187] (5 protein domains)
  6. 2070117Protein Seed storage 7S protein [51188] (6 species)
    duplication: consists of two germin-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germin hexamer
  7. 2070159Species Soybean (Glycine max), beta-conglycinin beta subunit [TaxId:3847] [109608] (3 PDB entries)
    Uniprot P25974
  8. 2070176Domain d1ipjc1: 1ipj C:9-177 [71262]
    complexed with nag

Details for d1ipjc1

PDB Entry: 1ipj (more details), 2.7 Å

PDB Description: crystal structures of recombinant and native soybean beta-conglycinin beta homotrimers complexes with n-acetyl-d-glucosamine
PDB Compounds: (C:) beta-conglycinin, beta chain

SCOPe Domain Sequences for d1ipjc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ipjc1 b.82.1.2 (C:9-177) Seed storage 7S protein {Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]}

SCOPe Domain Coordinates for d1ipjc1:

Click to download the PDB-style file with coordinates for d1ipjc1.
(The format of our PDB-style files is described here.)

Timeline for d1ipjc1: