Lineage for d1i9jl1 (1i9j L:1-112)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 547289Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 547441Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)
  8. 547519Domain d1i9jl1: 1i9j L:1-112 [71146]
    Other proteins in same PDB: d1i9jh1, d1i9jh2, d1i9jl2
    part of anti-testosterone Fab
    complexed with tes

Details for d1i9jl1

PDB Entry: 1i9j (more details), 2.6 Å

PDB Description: testosterone complex structure of the recombinant monoclonal wild type anti-testosterone fab fragment

SCOP Domain Sequences for d1i9jl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1i9jl1 b.1.1.1 (L:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
dvvvtqtplslpvslgdqasiscrssqsivhsngnsylewylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpptfgggtkleik

SCOP Domain Coordinates for d1i9jl1:

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Timeline for d1i9jl1:

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Domains from same chain:
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d1i9jl2