Lineage for d1i9jh1 (1i9j H:1-118)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2739730Protein Immunoglobulin heavy chain variable domain, VH [88543] (22 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2740064Species Mouse (Mus musculus), cluster 2.1 [TaxId:10090] [88549] (15 PDB entries)
    Uniprot P18527 # HV56_MOUSE Ig heavy chain V region 914; 90% sequence identity
  8. 2740076Domain d1i9jh1: 1i9j H:1-118 [71144]
    Other proteins in same PDB: d1i9jh2, d1i9jl1, d1i9jl2
    part of anti-testosterone Fab
    complexed with tes

Details for d1i9jh1

PDB Entry: 1i9j (more details), 2.6 Å

PDB Description: testosterone complex structure of the recombinant monoclonal wild type anti-testosterone fab fragment
PDB Compounds: (H:) recombinant monoclonal anti-testosterone fab fragment heavy chain

SCOPe Domain Sequences for d1i9jh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1i9jh1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.1 [TaxId: 10090]}

SCOPe Domain Coordinates for d1i9jh1:

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Timeline for d1i9jh1:

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