Lineage for d1i9ih1 (1i9i H:1-118)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 546418Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 546419Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 546420Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)
  6. 546556Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 546744Species Mouse (Mus musculus), cluster 2.1 [TaxId:10090] [88549] (16 PDB entries)
  8. 546763Domain d1i9ih1: 1i9i H:1-118 [71140]
    Other proteins in same PDB: d1i9ih2, d1i9il1, d1i9il2
    part of anti-testosterone Fab

Details for d1i9ih1

PDB Entry: 1i9i (more details), 2.72 Å

PDB Description: native crystal structure of the recombinant monoclonal wild type anti-testosterone fab fragment

SCOP Domain Sequences for d1i9ih1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1i9ih1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 2.1}
evklvesggglvkpggslklscaasgftfstyalswvrqtadkrlewvasivsggntyys
gsvkgrftisrdiarnilylqmsslrsedtamyycareyygyvglaywgqgtlvtvsa

SCOP Domain Coordinates for d1i9ih1:

Click to download the PDB-style file with coordinates for d1i9ih1.
(The format of our PDB-style files is described here.)

Timeline for d1i9ih1:

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Domains from same chain:
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d1i9ih2