SCOPe 2.07: Domain d1h9ub_: 1h9u B:

Lineage for d1h9ub_ (1h9u B:)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Retinoid-X receptor beta (RXR-beta) [74792] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [74793] (2 PDB entries)
   Uniprot P28702 298-528

8. Domain d1h9ub_: 1h9u B: [70924]
   complexed with cl, lg2, ni

Details for d1h9ub_

PDB Entry: 1h9u, 2.7 Å

PDB Description: the structure of the human retinoid-x-receptor beta ligand binding domain in complex with the specific synthetic agonist lg100268

PDB Compounds: (B:) retinoid x receptor, beta

SCOPe Domain Sequences for d1h9ub_:

Sequence, based on SEQRES records:

>d1h9ub_ a.123.1.1 (B:) Retinoid-X receptor beta (RXR-beta) {Human (Homo sapiens) [TaxId: 9606]}
mpvdrileaelaveqksdqgvegpggtggsgsspndpvtnicqaadkqlftlvewakrip
hfsslplddqvillragwnelliasfshrsidvrdgillatglhvhrnsahsagvgaifd
rvltelvskmrdmrmdktelgclraiilfnpdakglsnpsevevlrekvyasletyckqk
ypeqqgrfaklllrlpalrsiglkclehlfffkligdtpidtfl

Sequence, based on observed residues (ATOM records):

>d1h9ub_ a.123.1.1 (B:) Retinoid-X receptor beta (RXR-beta) {Human (Homo sapiens) [TaxId: 9606]}
mpvdrileaelavpvtnicqaadkqlftlvewakriphfsslplddqvillragwnelli
asfshrsidvrdgillatglhvhrnsahsagvgaifdrvltelvskmrdmrmdktelgcl
raiilfnpdakglsnpsevevlrekvyasletyckqkypeqqgrfaklllrlpalrsigl
kclehlfffkligdtpidtfl

Timeline for d1h9ub_:

• d1h9ub_ first appeared in SCOP 1.61
  
• d1h9ub_ appears in SCOPe 2.06
  
• d1h9ub_ appears in the current release, SCOPe 2.08