SCOPe 2.05: Domain d1gy9b_: 1gy9 B:

Lineage for d1gy9b_ (1gy9 B:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.5: TauD/TfdA-like [75038] (3 proteins)
   automatically mapped to Pfam PF02668

6. Protein Taurine/alpha-ketoglutarate dioxygenase TauD [75039] (1 species)

7. Species Escherichia coli [TaxId:562] [75040] (4 PDB entries)

8. Domain d1gy9b_: 1gy9 B: [70743]
   complexed with akg, fe, tau

Details for d1gy9b_

PDB Entry: 1gy9, 2.5 Å

PDB Description: taurine/alpha-ketoglutarate dioxygenase from escherichia coli

PDB Compounds: (B:) Alpha-Ketoglutarate-Dependent Taurine Dioxygenase

SCOPe Domain Sequences for d1gy9b_:

Sequence, based on SEQRES records:

>d1gy9b_ b.82.2.5 (B:) Taurine/alpha-ketoglutarate dioxygenase TauD {Escherichia coli [TaxId: 562]}
erlsitplgpyigaqisgadltrplsdnqfeqlyhavlrhqvvflrdqaitpqqqralaq
rfgelhihpvyphaegvdeiivldthndnppdndnwhtdvtfietppagailaakelpst
ggdtlwtsgiaayealsvpfrqllsglraehdfrksfpeykyrkteeehqrwreavaknp
pllhpvvrthpvsgkqalfvnegfttrivdvsekeseallsflfahitkpefqvrwrwqp
ndiaiwdnrvtqhyanadylpqrrimhratilgdkpfyra

Sequence, based on observed residues (ATOM records):

>d1gy9b_ b.82.2.5 (B:) Taurine/alpha-ketoglutarate dioxygenase TauD {Escherichia coli [TaxId: 562]}
erlsitplgpyigaqisgadltrplsdnqfeqlyhavlrhqvvflrdqaitpqqqralaq
rfgelhihpvyphaegvdeiivldthndnppdndnwhtdvtfietppagailaakelpst
ggdtlwtsgiaayealsvpfrqllsglraehdfrksfpeykyehqrwreavaknppllhp
vvrthpvsgkqalfvnegfttrivdvsekeseallsflfahitkpefqvrwrwqpndiai
wdnrvtqhyanadylpqrrimhratilgdkpfyra

Timeline for d1gy9b_:

• d1gy9b_ first appeared in SCOP 1.61
  
• d1gy9b_ appears in SCOPe 2.04
  
• d1gy9b_ appears in SCOPe 2.06
  
• d1gy9b_ appears in the current release, SCOPe 2.08