Lineage for d1gkqb2 (1gkq B:55-389)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2833366Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2833715Family c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain [75073] (5 proteins)
    automatically mapped to Pfam PF13147
  6. 2833716Protein D-hydantoinase [75074] (4 species)
  7. 2833734Species Thermus sp. [TaxId:275] [75075] (2 PDB entries)
  8. 2833742Domain d1gkqb2: 1gkq B:55-389 [70246]
    Other proteins in same PDB: d1gkqa1, d1gkqb1, d1gkqc1, d1gkqd1
    complexed with zn

Details for d1gkqb2

PDB Entry: 1gkq (more details), 2.6 Å

PDB Description: d-hydantoinase (dihydropyrimidinase) from thermus sp. in space group p212121
PDB Compounds: (B:) hydantoinase

SCOPe Domain Sequences for d1gkqb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1gkqb2 c.1.9.6 (B:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]}

SCOPe Domain Coordinates for d1gkqb2:

Click to download the PDB-style file with coordinates for d1gkqb2.
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Timeline for d1gkqb2: