SCOP 1.71: Domain d1gj4.1: 1gj4 L:,H:

Lineage for d1gj4.1 (1gj4 L:,H:)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (4 families)

5. Family b.47.1.2: Eukaryotic proteases [50514] (47 proteins)

6. Protein Thrombin [50531] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [50532] (157 PDB entries)

8. Domain d1gj4.1: 1gj4 L:,H: [70177]
   complexed with 132, na, sty

Details for d1gj4.1

PDB Entry: 1gj4, 1.81 Å

PDB Description: selectivity at s1, h2o displacement, upa, tpa, ser190/ala190 protease, structure-based drug design

SCOP Domain Sequences for d1gj4.1:

Sequence, based on SEQRES records:

>g1gj4.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens)}
eadcglrplfekksledkterellesyiXivegsdaeigmspwqvmlfrkspqellcgas
lisdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiyihpryn
wrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketwtan
vgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvm
kspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfg

Sequence, based on observed residues (ATOM records):

>g1gj4.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens)}
eadcglrplfekksledkterellesyiXivegsdaeigmspwqvmlfrkspqellcgas
lisdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiyihpryn
wrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlketgqps
vlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmkspfnnr
wyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfg

Timeline for d1gj4.1:

• d1gj4.1 first appeared in SCOP 1.61
  
• d1gj4.1 appears in SCOP 1.69
  
• d1gj4.1 appears in SCOP 1.73
  
• d1gj4.1 appears in the current release, SCOPe 2.08