Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. Superfamily d.79.5: IpsF-like [69765] (2 families) (S)
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. Family d.79.5.1: IpsF-like [69766] (3 proteins)
    automatically mapped to Pfam PF02542
  6. Protein 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767] (6 species)
  7. Species Escherichia coli [TaxId:562] [69768] (14 PDB entries)
    Uniprot P62617 ! Uniprot P36663

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1gx1:
    1. Domain d1gx1a1: 1gx1 A:1-156 [70675]
      Other proteins in same PDB: d1gx1a2, d1gx1b2, d1gx1c2
      complexed with cdp, mn, so4, zn
    2. Domain d1gx1b1: 1gx1 B:1-156 [70676]
      Other proteins in same PDB: d1gx1a2, d1gx1b2, d1gx1c2
      complexed with cdp, mn, so4, zn
    3. Domain d1gx1c1: 1gx1 C:1-156 [70677]
      Other proteins in same PDB: d1gx1a2, d1gx1b2, d1gx1c2
      complexed with cdp, mn, so4, zn
  2. Domain(s) for 1h47:
    1. Domain d1h47a1: 1h47 A:1-156 [111615]
      Other proteins in same PDB: d1h47a2, d1h47b2, d1h47c2, d1h47d2, d1h47e2, d1h47f2
      complexed with c5p, gpp, zn
    2. Domain d1h47b1: 1h47 B:1-156 [111616]
      Other proteins in same PDB: d1h47a2, d1h47b2, d1h47c2, d1h47d2, d1h47e2, d1h47f2
      complexed with c5p, gpp, zn
    3. Domain d1h47c1: 1h47 C:1-156 [111617]
      Other proteins in same PDB: d1h47a2, d1h47b2, d1h47c2, d1h47d2, d1h47e2, d1h47f2
      complexed with c5p, gpp, zn
    4. Domain d1h47d1: 1h47 D:1-156 [111618]
      Other proteins in same PDB: d1h47a2, d1h47b2, d1h47c2, d1h47d2, d1h47e2, d1h47f2
      complexed with c5p, gpp, zn
    5. Domain d1h47e1: 1h47 E:1-156 [111619]
      Other proteins in same PDB: d1h47a2, d1h47b2, d1h47c2, d1h47d2, d1h47e2, d1h47f2
      complexed with c5p, gpp, zn
    6. Domain d1h47f1: 1h47 F:1-156 [111620]
      Other proteins in same PDB: d1h47a2, d1h47b2, d1h47c2, d1h47d2, d1h47e2, d1h47f2
      complexed with c5p, gpp, zn
  3. Domain(s) for 1h48:
    1. Domain d1h48a1: 1h48 A:1-156 [111621]
      Other proteins in same PDB: d1h48a2, d1h48b2, d1h48c2, d1h48d2, d1h48e2, d1h48f2
      complexed with c5p, cdi, gpp, mn, zn
    2. Domain d1h48b1: 1h48 B:1-156 [111622]
      Other proteins in same PDB: d1h48a2, d1h48b2, d1h48c2, d1h48d2, d1h48e2, d1h48f2
      complexed with c5p, cdi, gpp, mn, zn
    3. Domain d1h48c1: 1h48 C:1-157 [111623]
      Other proteins in same PDB: d1h48a2, d1h48b2, d1h48c2, d1h48d2, d1h48e2, d1h48f2
      complexed with c5p, cdi, gpp, mn, zn
    4. Domain d1h48d1: 1h48 D:1-156 [111624]
      Other proteins in same PDB: d1h48a2, d1h48b2, d1h48c2, d1h48d2, d1h48e2, d1h48f2
      complexed with c5p, cdi, gpp, mn, zn
    5. Domain d1h48e1: 1h48 E:1-156 [111625]
      Other proteins in same PDB: d1h48a2, d1h48b2, d1h48c2, d1h48d2, d1h48e2, d1h48f2
      complexed with c5p, cdi, gpp, mn, zn
    6. Domain d1h48f1: 1h48 F:1-157 [111626]
      Other proteins in same PDB: d1h48a2, d1h48b2, d1h48c2, d1h48d2, d1h48e2, d1h48f2
      complexed with c5p, cdi, gpp, mn, zn
  4. Domain(s) for 1jy8:
  5. Domain(s) for 1knj:
  6. Domain(s) for 1knk:
  7. Domain(s) for 1u3l:
  8. Domain(s) for 1u3p:
  9. Domain(s) for 1u40:
  10. Domain(s) for 1u43:
  11. Domain(s) for 1yqn:
  12. Domain(s) for 2amt:
    1. Domain d2amta_: 2amt A: [162834]
      automated match to d1h48c_
      complexed with 1aa, gpp, zn
    2. Domain d2amtb_: 2amt B: [162835]
      automated match to d1h48c_
      complexed with 1aa, gpp, zn
    3. Domain d2amtc_: 2amt C: [162836]
      automated match to d1h48c_
      complexed with 1aa, gpp, zn
    4. Domain d2amtd_: 2amt D: [162837]
      automated match to d1h48c_
      complexed with 1aa, gpp, zn
    5. Domain d2amte_: 2amt E: [162838]
      automated match to d1h48c_
      complexed with 1aa, gpp, zn
    6. Domain d2amtf_: 2amt F: [162839]
      automated match to d1h48c_
      complexed with 1aa, gpp, zn
  13. Domain(s) for 2ao4:
  14. Domain(s) for 2gzl:

More info for Species Escherichia coli [TaxId:562] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF

Timeline for Species Escherichia coli [TaxId:562] from d.79.5.1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF: