Lineage for Protein: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 606051Fold d.79: Bacillus chorismate mutase-like [55297] (7 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 606302Superfamily d.79.5: IpsF-like [69765] (1 family) (S)
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 606303Family d.79.5.1: IpsF-like [69766] (2 proteins)
  6. 606304Protein 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767] (4 species)

Species:

  1. 606305Escherichia coli [TaxId:562] [69768] (10 PDB entries)
    1. Domains for 1gx1:
      1. 606306Domain d1gx1a_: 1gx1 A: [70675]
      2. 606307Domain d1gx1b_: 1gx1 B: [70676]
      3. 606308Domain d1gx1c_: 1gx1 C: [70677]
        complexed with cdf, mn, mse, so4, zn
    2. Domains for 1h47:
      1. 606309Domain d1h47a_: 1h47 A: [111615]
      2. 606310Domain d1h47b_: 1h47 B: [111616]
      3. 606311Domain d1h47c_: 1h47 C: [111617]
      4. 606312Domain d1h47d_: 1h47 D: [111618]
      5. 606313Domain d1h47e_: 1h47 E: [111619]
      6. 606314Domain d1h47f_: 1h47 F: [111620]
        complexed with c5p, gpp, zn
    3. Domains for 1h48:
      1. 606315Domain d1h48a_: 1h48 A: [111621]
      2. 606316Domain d1h48b_: 1h48 B: [111622]
      3. 606317Domain d1h48c_: 1h48 C: [111623]
      4. 606318Domain d1h48d_: 1h48 D: [111624]
      5. 606319Domain d1h48e_: 1h48 E: [111625]
      6. 606320Domain d1h48f_: 1h48 F: [111626]
        complexed with c5p, cdi, gpp, mn, zn
    4. Domain for 1jy8:
    5. Domain for 1knj:
    6. Domain for 1knk:
    7. Domain for 1u3l:
    8. Domain for 1u3p:
    9. Domain for 1u40:
    10. Domain for 1u43:
  2. 606328Haemophilus influenzae [TaxId:727] [75479] (3 PDB entries)
    1. Domains for 1jn1:
      1. 606341Domain d1jn1a_: 1jn1 A: [71754]
      2. 606342Domain d1jn1b_: 1jn1 B: [71755]
      3. 606343Domain d1jn1c_: 1jn1 C: [71756]
        structural genomics
        complexed with co, so4
    2. Domains for 1vh8:
      1. 606329Domain d1vh8a_: 1vh8 A: [100647]
      2. 606330Domain d1vh8b_: 1vh8 B: [100648]
      3. 606331Domain d1vh8c_: 1vh8 C: [100649]
      4. 606332Domain d1vh8d_: 1vh8 D: [100650]
      5. 606333Domain d1vh8e_: 1vh8 E: [100651]
      6. 606334Domain d1vh8f_: 1vh8 F: [100652]
        structural genomics
        complexed with acy, pop
    3. Domains for 1vha:
      1. 606335Domain d1vhaa_: 1vha A: [100655]
      2. 606336Domain d1vhab_: 1vha B: [100656]
      3. 606337Domain d1vhac_: 1vha C: [100657]
      4. 606338Domain d1vhad_: 1vha D: [100658]
      5. 606339Domain d1vhae_: 1vha E: [100659]
      6. 606340Domain d1vhaf_: 1vha F: [100660]
        structural genomics
        complexed with acy, mn, pop
  3. 606344Shewanella oneidensis [TaxId:70863] [118026] (1 PDB entry)
  4. 606348Thermus thermophilus [TaxId:274] [82720] (4 PDB entries)
    1. Domains for 1iv1:
      1. 606367Domain d1iv1a_: 1iv1 A: [76816]
      2. 606368Domain d1iv1b_: 1iv1 B: [76817]
      3. 606369Domain d1iv1c_: 1iv1 C: [76818]
      4. 606370Domain d1iv1d_: 1iv1 D: [76819]
      5. 606371Domain d1iv1e_: 1iv1 E: [76820]
      6. 606372Domain d1iv1f_: 1iv1 F: [76821]
    2. Domains for 1iv2:
      1. 606355Domain d1iv2a_: 1iv2 A: [76822]
      2. 606356Domain d1iv2b_: 1iv2 B: [76823]
      3. 606357Domain d1iv2c_: 1iv2 C: [76824]
      4. 606358Domain d1iv2d_: 1iv2 D: [76825]
      5. 606359Domain d1iv2e_: 1iv2 E: [76826]
      6. 606360Domain d1iv2f_: 1iv2 F: [76827]
        complexed with cdp, mg; mutant
    3. Domains for 1iv3:
      1. 606349Domain d1iv3a_: 1iv3 A: [76828]
      2. 606350Domain d1iv3b_: 1iv3 B: [76829]
      3. 606351Domain d1iv3c_: 1iv3 C: [76830]
      4. 606352Domain d1iv3d_: 1iv3 D: [76831]
      5. 606353Domain d1iv3e_: 1iv3 E: [76832]
      6. 606354Domain d1iv3f_: 1iv3 F: [76833]
        complexed with mg; mutant
    4. Domains for 1iv4:
      1. 606361Domain d1iv4a_: 1iv4 A: [76834]
      2. 606362Domain d1iv4b_: 1iv4 B: [76835]
      3. 606363Domain d1iv4c_: 1iv4 C: [76836]
      4. 606364Domain d1iv4d_: 1iv4 D: [76837]
      5. 606365Domain d1iv4e_: 1iv4 E: [76838]
      6. 606366Domain d1iv4f_: 1iv4 F: [76839]
        complexed with c5p, mg; mutant

More info for Protein 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from d.79.5.1: IpsF-like

Timeline for Protein 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from d.79.5.1: IpsF-like: