Lineage for Protein: Pseudouridine synthase II TruB

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2615008Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. 2615009Superfamily d.265.1: Pseudouridine synthase [55120] (5 families) (S)
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
  5. 2615024Family d.265.1.2: Pseudouridine synthase II TruB [69746] (2 proteins)
    contains C-terminal PUA domain
  6. 2615025Protein Pseudouridine synthase II TruB [69747] (5 species)

Species:

  1. 2615026Escherichia coli [TaxId:562] [69748] (3 PDB entries)
    1. Domain for 1k8w:
    2. Domain for 1r3f:
    3. Domain for 1zl3:
  2. 2615030Methanococcus jannaschii [TaxId:2190] [143435] (1 PDB entry)
    Uniprot Q57612 17-246
  3. 2615032Mycobacterium tuberculosis [TaxId:1773] [103017] (2 PDB entries)
    1. Domains for 1s71:
      1. 2615035Domain d1s71a1: 1s71 A:3-235 [303043]
        Other proteins in same PDB: d1s71a2, d1s71b2
        automated match to d1sgva2
      2. 2615036Domain d1s71b1: 1s71 B:1-235 [303045]
        Other proteins in same PDB: d1s71a2, d1s71b2
        automated match to d1sgvb2
    2. Domains for 1sgv:
      1. 2615033Domain d1sgva2: 1sgv A:3-235 [98859]
        Other proteins in same PDB: d1sgva1, d1sgvb1
      2. 2615034Domain d1sgvb2: 1sgv B:1-235 [98861]
        Other proteins in same PDB: d1sgva1, d1sgvb1
  4. 2615037Pyrococcus furiosus [TaxId:2261] [143434] (2 PDB entries)
    Uniprot Q7LWY0 5-249
    1. Domains for 2ey4:
      1. 2615039Domain d2ey4a2: 2ey4 A:8-252 [132579]
        Other proteins in same PDB: d2ey4a1, d2ey4b1, d2ey4c1, d2ey4d_, d2ey4e1, d2ey4f_
        complexed with zn
      2. 2615040Domain d2ey4b2: 2ey4 B:11-252 [132581]
        Other proteins in same PDB: d2ey4a1, d2ey4b1, d2ey4c1, d2ey4d_, d2ey4e1, d2ey4f_
        automated match to d2ey4a2
        complexed with zn
    2. Domain for 2hvy:
  5. 2615041Thermotoga maritima [TaxId:2336] [103016] (4 PDB entries)
    1. Domain for 1r3e:
    2. Domains for 1ze1:
      1. 2615044Domain d1ze1a2: 1ze1 A:1-228 [124963]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automated match to d1r3ea2
        complexed with mg
      2. 2615045Domain d1ze1b2: 1ze1 B:1-228 [124965]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automated match to d1r3ea2
        complexed with mg
      3. 2615046Domain d1ze1c2: 1ze1 C:1-228 [124967]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automated match to d1r3ea2
        complexed with mg
      4. 2615047Domain d1ze1d2: 1ze1 D:1-228 [124969]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automated match to d1r3ea2
        complexed with mg
    3. Domains for 1ze2:
      1. 2615048Domain d1ze2a2: 1ze2 A:1-228 [124971]
        Other proteins in same PDB: d1ze2a1, d1ze2b1
        automated match to d1r3ea2
        protein/RNA complex
      2. 2615049Domain d1ze2b2: 1ze2 B:1-228 [124973]
        Other proteins in same PDB: d1ze2a1, d1ze2b1
        automatically matched to d1r3ea2
        protein/RNA complex
    4. Domain for 2ab4:

More info for Protein Pseudouridine synthase II TruB from d.265.1.2: Pseudouridine synthase II TruB

Timeline for Protein Pseudouridine synthase II TruB from d.265.1.2: Pseudouridine synthase II TruB: