Lineage for Species: Spinach (Spinacia oleracea) [TaxId: 3562]

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1576363Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 1576364Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 1578283Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
    family members also share a common alpha+beta fold in C-terminal domain
  6. 1578524Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)
  7. 1578655Species Spinach (Spinacia oleracea) [TaxId:3562] [69409] (8 PDB entries)
    Uniprot P19866

PDB entries in Species: Spinach (Spinacia oleracea) [TaxId: 3562]:

  1. Domain(s) for 1jn0:
    1. 1578680Domain d1jn0a1: 1jn0 A:0-148,A:313-333 [66915]
      Other proteins in same PDB: d1jn0a2, d1jn0b2, d1jn0o2
      complexed with ndp, so4
    2. 1578681Domain d1jn0b1: 1jn0 B:0-148,B:313-333 [66917]
      Other proteins in same PDB: d1jn0a2, d1jn0b2, d1jn0o2
      complexed with ndp, so4
    3. 1578682Domain d1jn0o1: 1jn0 O:0-148,O:313-333 [66919]
      Other proteins in same PDB: d1jn0a2, d1jn0b2, d1jn0o2
      complexed with ndp, so4
  2. Domain(s) for 1nbo:
    1. 1578665Domain d1nboa1: 1nbo A:0-148,A:313-334 [85526]
      Other proteins in same PDB: d1nboa2, d1nbob2, d1nboo2
      complexed with nad, so4
    2. 1578666Domain d1nbob1: 1nbo B:0-148,B:313-333 [85528]
      Other proteins in same PDB: d1nboa2, d1nbob2, d1nboo2
      complexed with nad, so4
    3. 1578667Domain d1nboo1: 1nbo O:0-148,O:313-334 [85530]
      Other proteins in same PDB: d1nboa2, d1nbob2, d1nboo2
      complexed with nad, so4
  3. Domain(s) for 1rm3:
    1. 1578662Domain d1rm3a1: 1rm3 A:1-148,A:313-333 [104994]
      Other proteins in same PDB: d1rm3a2, d1rm3b2, d1rm3o2
      complexed with ndp, so4; mutant
    2. 1578663Domain d1rm3b1: 1rm3 B:1-148,B:313-333 [104996]
      Other proteins in same PDB: d1rm3a2, d1rm3b2, d1rm3o2
      complexed with ndp, so4; mutant
    3. 1578664Domain d1rm3o1: 1rm3 O:1-148,O:313-333 [104998]
      Other proteins in same PDB: d1rm3a2, d1rm3b2, d1rm3o2
      complexed with ndp, so4; mutant
  4. Domain(s) for 1rm4:
    1. 1578656Domain d1rm4a1: 1rm4 A:1-148,A:313-333 [105000]
      Other proteins in same PDB: d1rm4a2, d1rm4b2, d1rm4o2
      complexed with ndp, so4
    2. 1578657Domain d1rm4b1: 1rm4 B:1-148,B:313-333 [105002]
      Other proteins in same PDB: d1rm4a2, d1rm4b2, d1rm4o2
      complexed with ndp, so4
    3. 1578658Domain d1rm4o1: 1rm4 O:1-148,O:313-333 [105004]
      Other proteins in same PDB: d1rm4a2, d1rm4b2, d1rm4o2
      complexed with ndp, so4
  5. Domain(s) for 1rm5:
    1. 1578659Domain d1rm5a1: 1rm5 A:1-148,A:313-333 [105006]
      Other proteins in same PDB: d1rm5a2, d1rm5b2, d1rm5o2
      complexed with ndp, so4; mutant
    2. 1578660Domain d1rm5b1: 1rm5 B:1-148,B:313-333 [105008]
      Other proteins in same PDB: d1rm5a2, d1rm5b2, d1rm5o2
      complexed with ndp, so4; mutant
    3. 1578661Domain d1rm5o1: 1rm5 O:1-148,O:313-333 [105010]
      Other proteins in same PDB: d1rm5a2, d1rm5b2, d1rm5o2
      complexed with ndp, so4; mutant
  6. Domain(s) for 2hki:
  7. Domain(s) for 2pkq:
    1. 1578684Domain d2pkqo1: 2pkq O:0-148,O:313-333 [145748]
      Other proteins in same PDB: d2pkqo2, d2pkqp2, d2pkqq2, d2pkqr2, d2pkqs2, d2pkqt2
      complexed with ndp, so4
    2. 1578685Domain d2pkqp1: 2pkq P:0-148,P:313-332 [139710]
      Other proteins in same PDB: d2pkqo2, d2pkqp2, d2pkqq2, d2pkqr2, d2pkqs2, d2pkqt2
      automatically matched to d1nboa1
      complexed with ndp, so4
    3. 1578686Domain d2pkqq1: 2pkq Q:0-148,Q:313-333 [145750]
      Other proteins in same PDB: d2pkqo2, d2pkqp2, d2pkqq2, d2pkqr2, d2pkqs2, d2pkqt2
      automatically matched to 2PKQ O:0-148,O:313-333
      complexed with ndp, so4
    4. 1578687Domain d2pkqr1: 2pkq R:0-148,R:313-332 [139712]
      Other proteins in same PDB: d2pkqo2, d2pkqp2, d2pkqq2, d2pkqr2, d2pkqs2, d2pkqt2
      automatically matched to d1nboa1
      complexed with ndp, so4
    5. 1578688Domain d2pkqs1: 2pkq S:0-148,S:313-332 [139714]
      Other proteins in same PDB: d2pkqo2, d2pkqp2, d2pkqq2, d2pkqr2, d2pkqs2, d2pkqt2
      automatically matched to d1nboa1
      complexed with ndp, so4
    6. 1578689Domain d2pkqt1: 2pkq T:0-148,T:313-333 [145752]
      Other proteins in same PDB: d2pkqo2, d2pkqp2, d2pkqq2, d2pkqr2, d2pkqs2, d2pkqt2
      automatically matched to 2PKQ O:0-148,O:313-333
      complexed with ndp, so4
  8. Domain(s) for 2pkr:
    1. 1578668Domain d2pkra1: 2pkr A:0-148,A:313-333 [139716]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    2. 1578669Domain d2pkrb1: 2pkr B:0-148,B:313-333 [139718]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    3. 1578670Domain d2pkrc1: 2pkr C:0-148,C:313-333 [139720]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    4. 1578671Domain d2pkrd1: 2pkr D:0-148,D:313-333 [139722]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    5. 1578672Domain d2pkrh1: 2pkr H:0-148,H:313-333 [139724]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    6. 1578673Domain d2pkri1: 2pkr I:0-148,I:313-333 [139726]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    7. 1578674Domain d2pkrl1: 2pkr L:0-148,L:313-333 [139728]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    8. 1578675Domain d2pkrm1: 2pkr M:0-148,M:313-333 [139730]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    9. 1578676Domain d2pkro1: 2pkr O:0-148,O:313-333 [139732]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    10. 1578677Domain d2pkrp1: 2pkr P:0-148,P:313-333 [139734]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    11. 1578678Domain d2pkrq1: 2pkr Q:0-148,Q:313-333 [139736]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4
    12. 1578679Domain d2pkrr1: 2pkr R:0-148,R:313-333 [139738]
      Other proteins in same PDB: d2pkra2, d2pkrb2, d2pkrc2, d2pkrd2, d2pkrh2, d2pkri2, d2pkrl2, d2pkrm2, d2pkro2, d2pkrp2, d2pkrq2, d2pkrr2
      automatically matched to d1nboa1
      complexed with ndp, so4

More info for Species Spinach (Spinacia oleracea) [TaxId:3562] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)

Timeline for Species Spinach (Spinacia oleracea) [TaxId:3562] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH):