SCOPe 2.08: Protein: L-Ala-D/L-Glu epimerase

Lineage for Protein: L-Ala-D/L-Glu epimerase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)

(S)

binds metal ion (magnesium or manganese) in conserved site inside barrel
N-terminal alpha+beta domain is common to this superfamily

Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 proteins)
Protein L-Ala-D/L-Glu epimerase [69397] (2 species)

Species:

Bacillus subtilis [TaxId:1423] [69399] (2 PDB entries)
Uniprot O34508
1. Domains for 1jpm:
  1. Domain d1jpma1: 1jpm A:126-359 [67031]
    Other proteins in same PDB: d1jpma2, d1jpmb2, d1jpmc2, d1jpmd2
    complexed with gol, mg
  2. Domain d1jpmb1: 1jpm B:126-359 [67033]
    Other proteins in same PDB: d1jpma2, d1jpmb2, d1jpmc2, d1jpmd2
    complexed with gol, mg
  3. Domain d1jpmc1: 1jpm C:126-358 [67035]
    Other proteins in same PDB: d1jpma2, d1jpmb2, d1jpmc2, d1jpmd2
    complexed with gol, mg
  4. Domain d1jpmd1: 1jpm D:126-358 [67037]
    Other proteins in same PDB: d1jpma2, d1jpmb2, d1jpmc2, d1jpmd2
    complexed with gol, mg
2. Domains for 1tkk:
  1. Domain d1tkka1: 1tkk A:126-358 [107089]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  2. Domain d1tkkb1: 1tkk B:126-358 [107091]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  3. Domain d1tkkc1: 1tkk C:126-358 [107093]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  4. Domain d1tkkd1: 1tkk D:126-358 [107095]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  5. Domain d1tkke1: 1tkk E:126-358 [107097]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  6. Domain d1tkkf1: 1tkk F:126-358 [107099]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  7. Domain d1tkkg1: 1tkk G:126-358 [107101]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
  8. Domain d1tkkh1: 1tkk H:126-358 [107103]
    Other proteins in same PDB: d1tkka2, d1tkkb2, d1tkkc2, d1tkkd2, d1tkke2, d1tkkf2, d1tkkg2, d1tkkh2
    complexed with ala, mg
Escherichia coli [TaxId:562] [69398] (1 PDB entry)
- Domain for 1jpd:
  - Domain d1jpdx1: 1jpd X:114-321 [67014]
    Other proteins in same PDB: d1jpdx2

More info for Protein L-Ala-D/L-Glu epimerase from c.1.11.2: D-glucarate dehydratase-like

Timeline for Protein L-Ala-D/L-Glu epimerase from c.1.11.2: D-glucarate dehydratase-like:

Protein L-Ala-D/L-Glu epimerase from c.1.11.2: D-glucarate dehydratase-like first appeared in SCOP 1.59
Protein L-Ala-D/L-Glu epimerase from c.1.11.2: D-glucarate dehydratase-like appears in SCOPe 2.07