Lineage for Protein: Deoxyribose-phosphate aldolase DeoC

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 683918Superfamily c.1.10: Aldolase [51569] (8 families) (S)
    Common fold covers whole protein structure
  5. 683919Family c.1.10.1: Class I aldolase [51570] (12 proteins)
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. 684034Protein Deoxyribose-phosphate aldolase DeoC [69394] (6 species)

Species:

  1. 684035Aquifex aeolicus [TaxId:63363] [82271] (1 PDB entry)
  2. 684038Archaeon Aeropyrum pernix [TaxId:56636] [89493] (1 PDB entry)
  3. 684041Archaeon Pyrobaculum aerophilum [TaxId:13773] [141830] (1 PDB entry)
  4. 684044Escherichia coli [TaxId:562] [69395] (4 PDB entries)
    1. Domains for 1jcj:
      1. 684047Domain d1jcja_: 1jcj A: [66499]
      2. 684048Domain d1jcjb_: 1jcj B: [66500]
        complexed with hpd; mutant
    2. Domains for 1jcl:
      1. 684049Domain d1jcla_: 1jcl A: [66501]
      2. 684050Domain d1jclb_: 1jcl B: [66502]
        complexed with hpd
    3. Domains for 1ktn:
      1. 684051Domain d1ktna_: 1ktn A: [72988]
      2. 684052Domain d1ktnb_: 1ktn B: [72989]
    4. Domains for 1p1x:
      1. 684045Domain d1p1xa_: 1p1x A: [104060]
      2. 684046Domain d1p1xb_: 1p1x B: [104061]
  5. 684053Thermotoga maritima [TaxId:2336] [82270] (1 PDB entry)
    TM1559
  6. 684056Thermus thermophilus [TaxId:274] [89492] (2 PDB entries)
    1. Domains for 1j2w:
      1. 684061Domain d1j2wa_: 1j2w A: [84043]
      2. 684062Domain d1j2wb_: 1j2w B: [84044]
      3. 684063Domain d1j2wc_: 1j2w C: [84045]
      4. 684064Domain d1j2wd_: 1j2w D: [84046]
        structural genomics
    2. Domains for 1ub3:
      1. 684057Domain d1ub3a_: 1ub3 A: [88395]
      2. 684058Domain d1ub3b_: 1ub3 B: [88396]
      3. 684059Domain d1ub3c_: 1ub3 C: [88397]
      4. 684060Domain d1ub3d_: 1ub3 D: [88398]
        structural genomics
        complexed with hpd

More info for Protein Deoxyribose-phosphate aldolase DeoC from c.1.10.1: Class I aldolase

Timeline for Protein Deoxyribose-phosphate aldolase DeoC from c.1.10.1: Class I aldolase: