Lineage for Protein: Alpha subunit of glutamate synthase, central and FMN domains

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2080000Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) (S)
  5. 2080001Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 protein domains)
  6. 2080028Protein Alpha subunit of glutamate synthase, central and FMN domains [69381] (2 species)
    Central domain (residues 423-780) may be a rudiment form of the FMN domain

Species:

  1. 2080029Azospirillum brasilense [TaxId:192] [69382] (2 PDB entries)
    1. Domains for 1ea0:
      1. 2080030Domain d1ea0a2: 1ea0 A:423-1193 [64855]
        Other proteins in same PDB: d1ea0a1, d1ea0a3, d1ea0b1, d1ea0b3
        complexed with akg, f3s, fmn, omt
      2. 2080031Domain d1ea0b2: 1ea0 B:423-1193 [64858]
        Other proteins in same PDB: d1ea0a1, d1ea0a3, d1ea0b1, d1ea0b3
        complexed with akg, f3s, fmn, omt
    2. Domains for 2vdc:
      1. 2080032Domain d2vdca2: 2vdc A:423-1193 [152974]
        Other proteins in same PDB: d2vdca1, d2vdca3, d2vdcb1, d2vdcb3, d2vdcc1, d2vdcc3, d2vdcd1, d2vdcd3, d2vdce1, d2vdce3, d2vdcf1, d2vdcf3
        automatically matched to d1ea0a2
        complexed with akg, f3s, fad, fmn, omt, sf4
      2. 2080033Domain d2vdcb2: 2vdc B:423-1193 [152977]
        Other proteins in same PDB: d2vdca1, d2vdca3, d2vdcb1, d2vdcb3, d2vdcc1, d2vdcc3, d2vdcd1, d2vdcd3, d2vdce1, d2vdce3, d2vdcf1, d2vdcf3
        automatically matched to d1ea0a2
        complexed with akg, f3s, fad, fmn, omt, sf4
      3. 2080034Domain d2vdcc2: 2vdc C:423-1193 [152980]
        Other proteins in same PDB: d2vdca1, d2vdca3, d2vdcb1, d2vdcb3, d2vdcc1, d2vdcc3, d2vdcd1, d2vdcd3, d2vdce1, d2vdce3, d2vdcf1, d2vdcf3
        automatically matched to d1ea0a2
        complexed with akg, f3s, fad, fmn, omt, sf4
      4. 2080035Domain d2vdcd2: 2vdc D:423-1193 [152983]
        Other proteins in same PDB: d2vdca1, d2vdca3, d2vdcb1, d2vdcb3, d2vdcc1, d2vdcc3, d2vdcd1, d2vdcd3, d2vdce1, d2vdce3, d2vdcf1, d2vdcf3
        automatically matched to d1ea0a2
        complexed with akg, f3s, fad, fmn, omt, sf4
      5. 2080036Domain d2vdce2: 2vdc E:423-1193 [152986]
        Other proteins in same PDB: d2vdca1, d2vdca3, d2vdcb1, d2vdcb3, d2vdcc1, d2vdcc3, d2vdcd1, d2vdcd3, d2vdce1, d2vdce3, d2vdcf1, d2vdcf3
        automatically matched to d1ea0a2
        complexed with akg, f3s, fad, fmn, omt, sf4
      6. 2080037Domain d2vdcf2: 2vdc F:423-1193 [152989]
        Other proteins in same PDB: d2vdca1, d2vdca3, d2vdcb1, d2vdcb3, d2vdcc1, d2vdcc3, d2vdcd1, d2vdcd3, d2vdce1, d2vdce3, d2vdcf1, d2vdcf3
        automatically matched to d1ea0a2
        complexed with akg, f3s, fad, fmn, omt, sf4
  2. 2080038Synechocystis sp. [TaxId:1143] [75055] (5 PDB entries)
    1. Domain for 1llw:
    2. Domain for 1llz:
    3. Domain for 1lm1:
    4. Domains for 1ofd:
      1. 2080039Domain d1ofda2: 1ofd A:431-1239 [86936]
        Other proteins in same PDB: d1ofda1, d1ofda3, d1ofdb1, d1ofdb3
        complexed with akg, f3s, fmn
      2. 2080040Domain d1ofdb2: 1ofd B:431-1239 [86939]
        Other proteins in same PDB: d1ofda1, d1ofda3, d1ofdb1, d1ofdb3
        complexed with akg, f3s, fmn
    5. Domains for 1ofe:
      1. 2080041Domain d1ofea2: 1ofe A:431-1239 [86942]
        Other proteins in same PDB: d1ofea1, d1ofea3, d1ofeb1, d1ofeb3
        complexed with akg, f3s, fmn, onl
      2. 2080042Domain d1ofeb2: 1ofe B:431-1239 [86945]
        Other proteins in same PDB: d1ofea1, d1ofea3, d1ofeb1, d1ofeb3
        complexed with akg, f3s, fmn, onl

More info for Protein Alpha subunit of glutamate synthase, central and FMN domains from c.1.4.1: FMN-linked oxidoreductases

Timeline for Protein Alpha subunit of glutamate synthase, central and FMN domains from c.1.4.1: FMN-linked oxidoreductases:

  • Protein Alpha subunit of glutamate synthase, central and FMN domains from c.1.4.1: FMN-linked oxidoreductases first appeared in SCOP 1.59
  • Protein Alpha subunit of glutamate synthase, central and FMN domains from c.1.4.1: FMN-linked oxidoreductases appears in SCOPe 2.05