Lineage for Protein: RNase III endonuclease catalytic domain

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2013374Fold a.149: RNase III domain-like [69064] (1 superfamily)
    core: 5 helices; one helix is surrounded by the others
  4. 2013375Superfamily a.149.1: RNase III domain-like [69065] (3 families) (S)
  5. 2013376Family a.149.1.1: RNase III catalytic domain-like [69066] (2 protein domains)
    Pfam PF00636
  6. 2013380Protein RNase III endonuclease catalytic domain [69067] (2 species)

Species:

  1. 2013381Aquifex aeolicus [TaxId:63363] [69068] (12 PDB entries)
    1. Domains for 1i4s:
      1. 2013393Domain d1i4sa_: 1i4s A: [66026]
      2. 2013394Domain d1i4sb_: 1i4s B: [66027]
    2. Domains for 1jfz:
      1. 2013389Domain d1jfza_: 1jfz A: [66655]
        Other proteins in same PDB: d1jfzb2, d1jfzc2
        protein/RNA complex; complexed with mn
      2. 2013390Domain d1jfzb1: 1jfz B:200-347 [66656]
        Other proteins in same PDB: d1jfzb2, d1jfzc2
        protein/RNA complex; complexed with mn
      3. 2013391Domain d1jfzc1: 1jfz C:400-547 [66657]
        Other proteins in same PDB: d1jfzb2, d1jfzc2
        protein/RNA complex; complexed with mn
      4. 2013392Domain d1jfzd_: 1jfz D: [66658]
        Other proteins in same PDB: d1jfzb2, d1jfzc2
        protein/RNA complex; complexed with mn
    3. Domains for 1rc5:
      1. 2013395Domain d1rc5a_: 1rc5 A: [97283]
        Other proteins in same PDB: d1rc5b2, d1rc5c2
        protein/RNA complex; complexed with mg
      2. 2013396Domain d1rc5b1: 1rc5 B:200-347 [97284]
        Other proteins in same PDB: d1rc5b2, d1rc5c2
        protein/RNA complex; complexed with mg
      3. 2013397Domain d1rc5c1: 1rc5 C:400-547 [97285]
        Other proteins in same PDB: d1rc5b2, d1rc5c2
        protein/RNA complex; complexed with mg
      4. 2013398Domain d1rc5d_: 1rc5 D: [97286]
        Other proteins in same PDB: d1rc5b2, d1rc5c2
        protein/RNA complex; complexed with mg
    4. Domain for 1rc7:
    5. Domains for 1yyk:
      1. 2013401Domain d1yyka1: 1yyk A:1-150 [124218]
        Other proteins in same PDB: d1yyka2, d1yykb2
        automated match to d1rc7a1
        protein/RNA complex; complexed with trs
      2. 2013402Domain d1yykb1: 1yyk B:1-150 [124220]
        Other proteins in same PDB: d1yyka2, d1yykb2
        automated match to d1rc7a1
        protein/RNA complex; complexed with trs
    6. Domains for 1yyo:
      1. 2013403Domain d1yyoa1: 1yyo A:1-150 [124244]
        Other proteins in same PDB: d1yyoa2, d1yyob2
        automated match to d1rc7a1
        protein/RNA complex; complexed with trs; mutant
      2. 2013404Domain d1yyob1: 1yyo B:2-150 [124246]
        Other proteins in same PDB: d1yyoa2, d1yyob2
        automated match to d1rc7a1
        protein/RNA complex; complexed with trs; mutant
    7. Domains for 1yyw:
      1. 2013407Domain d1yywa1: 1yyw A:2-150 [124256]
        Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
        automated match to d1rc7a1
        protein/RNA complex
      2. 2013408Domain d1yywb1: 1yyw B:2-150 [124258]
        Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
        automated match to d1rc7a1
        protein/RNA complex
      3. 2013409Domain d1yywc1: 1yyw C:2-150 [124260]
        Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
        automated match to d1rc7a1
        protein/RNA complex
      4. 2013410Domain d1yywd1: 1yyw D:2-150 [124262]
        Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
        automated match to d1rc7a1
        protein/RNA complex
    8. Domains for 1yz9:
      1. 2013387Domain d1yz9a1: 1yz9 A:1-150 [124271]
        Other proteins in same PDB: d1yz9a2, d1yz9b2
        automated match to d1rc7a1
        protein/RNA complex; complexed with so4; mutant
      2. 2013388Domain d1yz9b1: 1yz9 B:3-150 [124273]
        Other proteins in same PDB: d1yz9a2, d1yz9b2
        automated match to d1rc7a1
        protein/RNA complex; complexed with so4; mutant
    9. Domains for 2ez6:
      1. 2013384Domain d2ez6a1: 2ez6 A:3-150 [132616]
        Other proteins in same PDB: d2ez6a2, d2ez6b2
        automated match to d1rc7a1
        protein/RNA complex; complexed with mg
      2. 2013385Domain d2ez6b1: 2ez6 B:3-150 [132618]
        Other proteins in same PDB: d2ez6a2, d2ez6b2
        automated match to d1rc7a1
        protein/RNA complex; complexed with mg
    10. Domains for 2nue:
      1. 2013405Domain d2nuea1: 2nue A:2-150 [148444]
        Other proteins in same PDB: d2nuea2, d2nueb2
        automated match to d1rc7a1
        protein/RNA complex
      2. 2013406Domain d2nueb1: 2nue B:1-150 [148446]
        Other proteins in same PDB: d2nuea2, d2nueb2
        automated match to d1rc7a1
        protein/RNA complex
    11. Domains for 2nuf:
      1. 2013399Domain d2nufa1: 2nuf A:2-150 [148448]
        Other proteins in same PDB: d2nufa2, d2nufb2
        automated match to d1rc7a1
        protein/RNA complex; complexed with mg
      2. 2013400Domain d2nufb1: 2nuf B:2-150 [148450]
        Other proteins in same PDB: d2nufa2, d2nufb2
        automated match to d1rc7a1
        protein/RNA complex; complexed with mg
    12. Domains for 2nug:
      1. 2013382Domain d2nuga1: 2nug A:3-150 [148452]
        Other proteins in same PDB: d2nuga2, d2nugb2
        automated match to d1rc7a1
        protein/RNA complex; complexed with mg
      2. 2013383Domain d2nugb1: 2nug B:3-150 [148454]
        Other proteins in same PDB: d2nuga2, d2nugb2
        automated match to d1rc7a1
        protein/RNA complex; complexed with mg
  2. 2013411Thermotoga maritima [TaxId:2336] [81817] (1 PDB entry)

More info for Protein RNase III endonuclease catalytic domain from a.149.1.1: RNase III catalytic domain-like

Timeline for Protein RNase III endonuclease catalytic domain from a.149.1.1: RNase III catalytic domain-like: