SCOPe 2.08: Protein: RNase III endonuclease catalytic domain

Lineage for Protein: RNase III endonuclease catalytic domain

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.149: RNase III domain-like [69064] (1 superfamily)
core: 5 helices; one helix is surrounded by the others
Superfamily a.149.1: RNase III domain-like [69065] (3 families)
Family a.149.1.1: RNase III catalytic domain-like [69066] (2 proteins)
Pfam PF00636
Protein RNase III endonuclease catalytic domain [69067] (2 species)

Species:

Aquifex aeolicus [TaxId:63363] [69068] (12 PDB entries)
1. Domains for 1i4s:
  1. Domain d1i4sa_: 1i4s A: [66026]
  2. Domain d1i4sb_: 1i4s B: [66027]
2. Domains for 1jfz:
  1. Domain d1jfza_: 1jfz A: [66655]
    Other proteins in same PDB: d1jfzb2, d1jfzc2
    protein/RNA complex; complexed with mn
  2. Domain d1jfzb1: 1jfz B:200-347 [66656]
    Other proteins in same PDB: d1jfzb2, d1jfzc2
    protein/RNA complex; complexed with mn
  3. Domain d1jfzc1: 1jfz C:400-547 [66657]
    Other proteins in same PDB: d1jfzb2, d1jfzc2
    protein/RNA complex; complexed with mn
  4. Domain d1jfzd_: 1jfz D: [66658]
    Other proteins in same PDB: d1jfzb2, d1jfzc2
    protein/RNA complex; complexed with mn
3. Domains for 1rc5:
  1. Domain d1rc5a_: 1rc5 A: [97283]
    Other proteins in same PDB: d1rc5b2, d1rc5c2
    protein/RNA complex; complexed with mg
  2. Domain d1rc5b1: 1rc5 B:200-347 [97284]
    Other proteins in same PDB: d1rc5b2, d1rc5c2
    protein/RNA complex; complexed with mg
  3. Domain d1rc5c1: 1rc5 C:400-547 [97285]
    Other proteins in same PDB: d1rc5b2, d1rc5c2
    protein/RNA complex; complexed with mg
  4. Domain d1rc5d_: 1rc5 D: [97286]
    Other proteins in same PDB: d1rc5b2, d1rc5c2
    protein/RNA complex; complexed with mg
4. Domain for 1rc7:
  - Domain d1rc7a1: 1rc7 A:1-150 [97289]
    Other proteins in same PDB: d1rc7a2
    protein/RNA complex; complexed with trs; mutant
5. Domains for 1yyk:
  1. Domain d1yyka1: 1yyk A:1-150 [124218]
    Other proteins in same PDB: d1yyka2, d1yykb2
    automated match to d1rc7a1
    protein/RNA complex; complexed with trs
  2. Domain d1yykb1: 1yyk B:1-150 [124220]
    Other proteins in same PDB: d1yyka2, d1yykb2
    automated match to d1rc7a1
    protein/RNA complex; complexed with trs
6. Domains for 1yyo:
  1. Domain d1yyoa1: 1yyo A:1-150 [124244]
    Other proteins in same PDB: d1yyoa2, d1yyob2
    automated match to d1rc7a1
    protein/RNA complex; complexed with trs; mutant
  2. Domain d1yyob1: 1yyo B:2-150 [124246]
    Other proteins in same PDB: d1yyoa2, d1yyob2
    automated match to d1rc7a1
    protein/RNA complex; complexed with trs; mutant
7. Domains for 1yyw:
  1. Domain d1yywa1: 1yyw A:2-150 [124256]
    Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
    automated match to d1rc7a1
    protein/RNA complex
  2. Domain d1yywb1: 1yyw B:2-150 [124258]
    Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
    automated match to d1rc7a1
    protein/RNA complex
  3. Domain d1yywc1: 1yyw C:2-150 [124260]
    Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
    automated match to d1rc7a1
    protein/RNA complex
  4. Domain d1yywd1: 1yyw D:2-150 [124262]
    Other proteins in same PDB: d1yywa2, d1yywb2, d1yywc2, d1yywd2
    automated match to d1rc7a1
    protein/RNA complex
8. Domains for 1yz9:
  1. Domain d1yz9a1: 1yz9 A:1-150 [124271]
    Other proteins in same PDB: d1yz9a2, d1yz9b2
    automated match to d1rc7a1
    protein/RNA complex; complexed with so4; mutant
  2. Domain d1yz9b1: 1yz9 B:3-150 [124273]
    Other proteins in same PDB: d1yz9a2, d1yz9b2
    automated match to d1rc7a1
    protein/RNA complex; complexed with so4; mutant
9. Domains for 2ez6:
  1. Domain d2ez6a1: 2ez6 A:3-150 [132616]
    Other proteins in same PDB: d2ez6a2, d2ez6b2
    automated match to d1rc7a1
    protein/RNA complex; complexed with mg
  2. Domain d2ez6b1: 2ez6 B:3-150 [132618]
    Other proteins in same PDB: d2ez6a2, d2ez6b2
    automated match to d1rc7a1
    protein/RNA complex; complexed with mg
10. Domains for 2nue:
  1. Domain d2nuea1: 2nue A:2-150 [148444]
    Other proteins in same PDB: d2nuea2, d2nueb2
    automated match to d1rc7a1
    protein/RNA complex
  2. Domain d2nueb1: 2nue B:1-150 [148446]
    Other proteins in same PDB: d2nuea2, d2nueb2
    automated match to d1rc7a1
    protein/RNA complex
11. Domains for 2nuf:
  1. Domain d2nufa1: 2nuf A:2-150 [148448]
    Other proteins in same PDB: d2nufa2, d2nufb2
    automated match to d1rc7a1
    protein/RNA complex; complexed with mg
  2. Domain d2nufb1: 2nuf B:2-150 [148450]
    Other proteins in same PDB: d2nufa2, d2nufb2
    automated match to d1rc7a1
    protein/RNA complex; complexed with mg
12. Domains for 2nug:
  1. Domain d2nuga1: 2nug A:3-150 [148452]
    Other proteins in same PDB: d2nuga2, d2nugb2
    automated match to d1rc7a1
    protein/RNA complex; complexed with mg
  2. Domain d2nugb1: 2nug B:3-150 [148454]
    Other proteins in same PDB: d2nuga2, d2nugb2
    automated match to d1rc7a1
    protein/RNA complex; complexed with mg
Thermotoga maritima [TaxId:2336] [81817] (1 PDB entry)
- Domains for 1o0w:
  1. Domain d1o0wa1: 1o0w A:1-167 [80751]
    Other proteins in same PDB: d1o0wa2, d1o0wa3, d1o0wb2, d1o0wb3
    CASP5
  2. Domain d1o0wb1: 1o0w B:1-167 [80753]
    Other proteins in same PDB: d1o0wa2, d1o0wa3, d1o0wb2, d1o0wb3
    CASP5

More info for Protein RNase III endonuclease catalytic domain from a.149.1.1: RNase III catalytic domain-like

Timeline for Protein RNase III endonuclease catalytic domain from a.149.1.1: RNase III catalytic domain-like:

Protein RNase III endonuclease catalytic domain from a.149.1.1: RNase III catalytic domain-like first appeared in SCOP 1.59, called Protein RNase III endonuclease domain from a.149.1.1: RNase III endonuclease domain
Protein RNase III endonuclease catalytic domain from a.149.1.1: RNase III catalytic domain-like appears in SCOPe 2.07