SCOPe 2.08: Domain d1knzn1: 1knz N:4-153

Lineage for d1knzn1 (1knz N:4-153)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.34: NSP3 homodimer [69902] (1 superfamily)
   2 domains: (1) all-alpha, (2) alpha+beta; asymmetric homodimer with each domain intertwining with its counterpart

4. Superfamily e.34.1: NSP3 homodimer [69903] (1 family)
   automatically mapped to Pfam PF01665

5. Family e.34.1.1: NSP3 homodimer [69904] (1 protein)

6. Protein NSP3 homodimer [69905] (1 species)
   non-structural RNA-binding protein

7. Species Simian 11 rotavirus [TaxId:10923] [69906] (1 PDB entry)

8. Domain d1knzn1: 1knz N:4-153 [68716]
   Other proteins in same PDB: d1knzb2, d1knzd2, d1knzj2, d1knzn2
   protein/RNA complex

Details for d1knzn1

PDB Entry: 1knz, 2.45 Å

PDB Description: recognition of the rotavirus mrna 3' consensus by an asymmetric nsp3 homodimer

PDB Compounds: (N:) Nonstructural RNA-binding Protein 34

SCOPe Domain Sequences for d1knzn1:

Sequence, based on SEQRES records:

>d1knzn1 e.34.1.1 (N:4-153) NSP3 homodimer {Simian 11 rotavirus [TaxId: 10923]}
mestqqmavsiinssfeaavvaatsalenmgieydyqdiysrvknkfdfvmddsgvknnp
igkaitidqalnnkfgsairnrnwladtsrpakldedvnklrmmlsskgidqkmrvlnac
fsvkripgksssiikctklmrdklergeve

Sequence, based on observed residues (ATOM records):

>d1knzn1 e.34.1.1 (N:4-153) NSP3 homodimer {Simian 11 rotavirus [TaxId: 10923]}
mestqqmavsiinssfeaavvaatsalenmgieydyqdiysrvknkfdfvmddsgvknnp
igkaitidqalndtsrpakldedvnklrmmlsskgidqkmrvlnacfsvkripgksssii
kctklmrdklergeve

Timeline for d1knzn1:

• d1knzn1 first appeared in SCOP 1.59, called d1knzn_
  
• d1knzn1 appears in SCOPe 2.07