Lineage for d1kepa_ (1kep A:)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 819418Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 819419Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families) (S)
  5. 819736Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (70 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. 820122Protein dTDP-glucose 4,6-dehydratase (RmlB) [51755] (4 species)
  7. 820131Species Streptococcus suis, serotype 2 [TaxId:1307] [69406] (6 PDB entries)
  8. 820134Domain d1kepa_: 1kep A: [68536]

Details for d1kepa_

PDB Entry: 1kep (more details), 1.8 Å

PDB Description: the crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb) from streptococcus suis with dtdp-xylose bound
PDB Compounds: (A:) dtdp-d-glucose 4,6-dehydratase

SCOP Domain Sequences for d1kepa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1kepa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}
qfkniivtggagfigsnfvhyvynnhpdvhvtvldkltyagnkanleailgdrvelvvgd
iadaelvdklaakadaivhyaaeshndnslndpspfihtnfigtytlleaarkydirfhh
vstdevygdlplredlpghgegpgekftaetnynpsspysstkaasdlivkawvrsfgvk
atisncsnnygpyqhiekfiprqitnilagikpklygegknvrdwihtndhstgvwailt
kgrmgetyligadgeknnkevlelilekmgqpkdaydhvtdraghdlryaidasklrdel
gwtpqftdfsegleetiqwytdnqdwwkaekeaveanyaktqevik

SCOP Domain Coordinates for d1kepa_:

Click to download the PDB-style file with coordinates for d1kepa_.
(The format of our PDB-style files is described here.)

Timeline for d1kepa_: