SCOPe 2.05: Domain d1k8gb1: 1k8g B:36-204

Lineage for d1k8gb1 (1k8g B:36-204)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.40: OB-fold [50198] (16 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)

5. Family b.40.4.3: Single strand DNA-binding domain, SSB [50263] (13 proteins)
   barrel, closed; n=5, S=10

6. Protein Telomere end binding protein alpha subunit [50273] (1 species)
   duplication: consists of three domains of this fold

7. Species Oxytricha nova [TaxId:200597] [50274] (16 PDB entries)

8. Domain d1k8gb1: 1k8g B:36-204 [68297]
   two-domain fragment
   protein/DNA complex; complexed with so4

Details for d1k8gb1

PDB Entry: 1k8g, 2.6 Å

PDB Description: Crystal Structure of the N-terminal domain of Oxytricha nova telomere end binding protein alpha subunit both uncomplexed and complexed with telomeric ssDNA

PDB Compounds: (B:) Telomere-binding protein alpha subunit

SCOPe Domain Sequences for d1k8gb1:

Sequence, based on SEQRES records:

>d1k8gb1 b.40.4.3 (B:36-204) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
yeyvelakasltsaqpqhfyavvidatfpyktnqeryicslkivdptlylkqqkgagdas
dyatlvlyakrfedlpiihragdiirvhratlrlyngqrqfnanvfyssswalfstdkrs
vtqeinnqdavsdttpfsfsskhatiekneisilqnlrkwanqyfssys

Sequence, based on observed residues (ATOM records):

>d1k8gb1 b.40.4.3 (B:36-204) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
yeyvelakasltsaqpqhfyavvidatfpyktnqeryicslkivdptlylkqqsdyatlv
lyakrfedlpiihragdiirvhratlrlyngqrqfnanvfyssswalfstdkrsvtqein
nqdavsdttpfsfsskhatiekneisilqnlrkwanqyfssys

Timeline for d1k8gb1:

• d1k8gb1 first appeared in SCOP 1.59
  
• d1k8gb1 appears in SCOPe 2.04
  
• d1k8gb1 appears in SCOPe 2.06
  
• d1k8gb1 appears in the current release, SCOPe 2.07