Lineage for d1k5wa_ (1k5w A:)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1304037Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 1304038Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 1304130Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 proteins)
    topologically similar to the C-terminal domain of PapD
  6. 1304154Protein Synaptogamin I [49576] (2 species)
    duplication: contains tandem repeat of two similar domains
  7. 1304162Species Norway rat (Rattus norvegicus) [TaxId:10116] [49577] (7 PDB entries)
    Uniprot P21707 271-419 ! Uniprot P21707 271-419
  8. 1304169Domain d1k5wa_: 1k5w A: [68212]
    second C2 domain
    complexed with ca

Details for d1k5wa_

PDB Entry: 1k5w (more details)

PDB Description: three-dimensional structure of the synaptotagmin 1 c2b-domain: synaptotagmin 1 as a phospholipid binding machine
PDB Compounds: (A:) Synaptotagmin I

SCOPe Domain Sequences for d1k5wa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1k5wa_ b.7.1.2 (A:) Synaptogamin I {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d1k5wa_:

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(The format of our PDB-style files is described here.)

Timeline for d1k5wa_: