SCOPe 2.07: Domain d1k06a_: 1k06 A:

Lineage for d1k06a_ (1k06 A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
   automatically mapped to Pfam PF00343

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (76 PDB entries)
   Uniprot P00489 ! Uniprot P00489

8. Domain d1k06a_: 1k06 A: [67908]
   complexed with bzd, plp

Details for d1k06a_

PDB Entry: 1k06, 1.8 Å

PDB Description: crystallographic binding study of 100 mm n-benzoyl-n'-beta-d- glucopyranosyl urea to glycogen phosphorylase b

PDB Compounds: (A:) glycogen phosphorylase

SCOPe Domain Sequences for d1k06a_:

Sequence, based on SEQRES records:

>d1k06a_ c.87.1.4 (A:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
isvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtqq
hyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedaglg
ngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpweka
rpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapndf
nlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfk
sskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktc
aytnhtvipealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslve
egavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitprrwl
vlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaaylere
ykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkaapg
yhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagte
asgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaqeyy
dripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyk
nprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpap

Sequence, based on observed residues (ATOM records):

>d1k06a_ c.87.1.4 (A:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
isvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtqq
hyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedaglg
ngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpweka
rpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapndg
yiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfksstnfdafp
dkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktcaytnhtvipealerwpvh
lletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslveegavkrinmahlciagsh
avngvarihseilkktifkdfyelephkfqnktngitprrwlvlcnpglaeiiaerigee
yisdldqlrkllsyvddeafirdvakvkqenklkfaaylereykvhinpnslfdvqvkri
heykrqllnclhvitlynrikkepnkfvvprtvmiggkaapgyhmakmiiklitaigdvv
nhdpvvgdrlrviflenyrvslaekvipaadlseqistagteasgtgnmkfmlngaltig
tmdganvemaeeageenffifgmrvedvdrldqrgynaqeyydripelrqiieqlssgff
spkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyknprewtrmvirniatsgk
fssdrtiaqyareiwgvepsrqrlpap

Timeline for d1k06a_:

• d1k06a_ first appeared in SCOP 1.59
  
• d1k06a_ appears in SCOPe 2.06
  
• d1k06a_ appears in the current release, SCOPe 2.08