Lineage for d1jxib_ (1jxi B:)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1618889Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 1618890Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 1618985Family c.72.1.2: Thiamin biosynthesis kinases [53620] (2 proteins)
  6. 1618986Protein 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) [69589] (2 species)
  7. 1618987Species Salmonella typhimurium [TaxId:90371] [69590] (2 PDB entries)
  8. 1618991Domain d1jxib_: 1jxi B: [67418]
    complexed with hmh, so4

Details for d1jxib_

PDB Entry: 1jxi (more details), 2.64 Å

PDB Description: 4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium complexed with 4-Amino-5-hydroxymethyl-2-methylpyrimidine
PDB Compounds: (B:) phosphomethylpyrimidine kinase

SCOPe Domain Sequences for d1jxib_:

Sequence, based on SEQRES records: (download)

>d1jxib_ c.72.1.2 (B:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}
mqrinaltiagtdpsggagiqadlktfsalgaygcsvitalvaentcgvqsvyriepdfv
aaqldsvfsdvridttkigmlaetdiveavaerlqrhhvrnvvldtvmlaksgdpllsps
aietlrvrllpqvslitpnlpeaaalldapharteqemlaqgrallamgceavlmkgghl
edaqspdwlftregeqrfsaprvntknthgtgctlsaalaalrprhrswgetvneakawl
saalaqadtlevgkgigpvhhfhaww

Sequence, based on observed residues (ATOM records): (download)

>d1jxib_ c.72.1.2 (B:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}
mqrinaltiagtdpsggagiqadlktfsalgaygcsvitalvaentcgvqsvyriepdfv
aaqldsvfsdvridttkigmlaetdiveavaerlqrhhvrnvvldtvmlaksgdpllsps
aietlrvrllpqvslitpnlpeaaalldapharteqemlaqgrallamgceavlmkgdwl
ftregeqrfrvntknthgtgctlsaalaalrprhrswgetvneakawlsaalaqadtlev
gkgigpvhhfhaww

SCOPe Domain Coordinates for d1jxib_:

Click to download the PDB-style file with coordinates for d1jxib_.
(The format of our PDB-style files is described here.)

Timeline for d1jxib_: