Class b: All beta proteins [48724] (149 folds) |
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies) sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional strands |
Superfamily b.1.1: Immunoglobulin [48726] (4 families) |
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins) |
Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species) VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species |
Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries) |
Domain d1jp5b1: 1jp5 B:1-112 [67003] Other proteins in same PDB: d1jp5a2, d1jp5b2 part of scFv 1695; complexed with the epitope peptide from HIV-1 protease |
PDB Entry: 1jp5 (more details), 2.7 Å
SCOP Domain Sequences for d1jp5b1:
Sequence; same for both SEQRES and ATOM records: (download)
>d1jp5b1 b.1.1.1 (B:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1} dilmtqtplylpvslgdqasiscrssqtivhnngntylewylqkpgqspqlliykvsnrf sgvpdrfsgsgsgtdftlkisrveaedlgiyycfqgshfpptfgggtkleik
Timeline for d1jp5b1: