SCOPe 2.07: Domain d1jnyb3: 1jny B:4-227

Lineage for d1jnyb3 (1jny B:4-227)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (80 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein Elongation factor eEF-1alpha, N-terminal (G) domain [52631] (2 species)
   eukaryotic and archaeal homologue of EF-Tu

7. Species Sulfolobus solfataricus [TaxId:2287] [69487] (2 PDB entries)
   Uniprot P35021

8. Domain d1jnyb3: 1jny B:4-227 [66987]
   Other proteins in same PDB: d1jnya1, d1jnya2, d1jnyb1, d1jnyb2
   complexed with gdp

Details for d1jnyb3

PDB Entry: 1jny, 1.8 Å

PDB Description: Crystal structure of Sulfolobus solfataricus elongation factor 1 alpha in complex with GDP

PDB Compounds: (B:) Elongation factor 1-alpha

SCOPe Domain Sequences for d1jnyb3:

Sequence, based on SEQRES records:

>d1jnyb3 c.37.1.8 (B:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
kphlnlivighvdhgkstlvgrllmdrgfidektvkeaeeaakklgkesekfaflldrlk
eerergvtinltfmrfetkkyfftiidapghrdfvknmitgasqadaailvvsakkgeye
agmsvegqtrehiilaktmgldqlivavnkmdlteppydekrykeivdqvskfmrsygfn
tnkvrfvpvvapsgdnithksenmkwyngptleeyldqlelppk

Sequence, based on observed residues (ATOM records):

>d1jnyb3 c.37.1.8 (B:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
kphlnlivighvdhgkstlvgrllmdrgfidektvkeaeeaakklgkesekfaflldrmr
fetkkyfftiidapghrdfvknmitgasqadaailvvsakkgeyeagmsvegqtrehiil
aktmgldqlivavnkmdlteppydekrykeivdqvskfmrsygfntnkvrfvpvvapsgd
nithksenmkwyngptleeyldqlelppk

Timeline for d1jnyb3:

• d1jnyb3 first appeared in SCOP 1.59
  
• d1jnyb3 appears in SCOPe 2.06
  
• d1jnyb3 appears in the current release, SCOPe 2.08