Lineage for d1jnnl1 (1jnn L:1-107)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287738Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 288075Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (146 PDB entries)
  8. 288219Domain d1jnnl1: 1jnn L:1-107 [66962]
    Other proteins in same PDB: d1jnnh1, d1jnnh2, d1jnnl2
    part of anti-estradiol Fab 17E12E5
    complexed with est

Details for d1jnnl1

PDB Entry: 1jnn (more details), 3.2 Å

PDB Description: Crystal Structure of Fab-Estradiol Complexes
PDB Compounds: (L:)

SCOP Domain Sequences for d1jnnl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1jnnl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
qivmtqtpaslsasvgetvtitcrasgniynylawyqqkqgkspqllvynaktlvdgvpl
rfsgsgsgtqyslkinslqpedfgnyychhfwntpytfgggtkleik

SCOP Domain Coordinates for d1jnnl1:

Click to download the PDB-style file with coordinates for d1jnnl1.
(The format of our PDB-style files is described here.)

Timeline for d1jnnl1:

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Domains from same chain:
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d1jnnl2