Lineage for d1jnlh1 (1jnl H:1-114)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 450916Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 451179Species Mouse (Mus musculus), cluster 3.1 [TaxId:10090] [88551] (28 PDB entries)
  8. 451210Domain d1jnlh1: 1jnl H:1-114 [66956]
    Other proteins in same PDB: d1jnlh2, d1jnll1, d1jnll2
    part of anti-estradiol Fab 17E12E5

Details for d1jnlh1

PDB Entry: 1jnl (more details), 3 Å

PDB Description: Crystal Structure of Fab-Estradiol Complexes

SCOP Domain Sequences for d1jnlh1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1jnlh1 b.1.1.1 (H:1-114) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.1}
evqlqqsgaelvkpgasvrlscsasgfnikdtymfwvkqrpeqgldwigrinpangisky
dprfqgkatltadtssntaylqldnltsedtavyycaiekdlpwgqgtlvtvsv

SCOP Domain Coordinates for d1jnlh1:

Click to download the PDB-style file with coordinates for d1jnlh1.
(The format of our PDB-style files is described here.)

Timeline for d1jnlh1:

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Domains from same chain:
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d1jnlh2