SCOP 1.71: Domain d1jnhd1: 1jnh D:1-117

Lineage for d1jnhd1 (1jnh D:1-117)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
   VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (148 PDB entries)

8. Domain d1jnhd1: 1jnh D:1-117 [66945]
   Other proteins in same PDB: d1jnha1, d1jnha2, d1jnhb2, d1jnhc1, d1jnhc2, d1jnhd2, d1jnhe1, d1jnhe2, d1jnhf2, d1jnhg1, d1jnhg2, d1jnhh2

Details for d1jnhd1

PDB Entry: 1jnh, 2.85 Å

PDB Description: crystal structure of fab-estradiol complexes

SCOP Domain Sequences for d1jnhd1:

Sequence; same for both SEQRES and ATOM records:

>d1jnhd1 b.1.1.1 (D:1-117) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2}
evqlqqsgaelarpgasvklscrtsgysfttywmqwvrqrpgqglewiaaiypgdddary
tqkfkgkatltadrsssivylqlnsltsedsavyscsrgrslyytmdywgqgtsvtv

Timeline for d1jnhd1:

• d1jnhd1 first appeared in SCOP 1.59
  
• d1jnhd1 appears in SCOP 1.69
  
• d1jnhd1 appears in SCOP 1.73
  
• d1jnhd1 appears in the current release, SCOPe 2.08