SCOPe 2.07: Domain d1jm6b1: 1jm6 B:1002-1169

Lineage for d1jm6b1 (1jm6 B:1002-1169)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.5: alpha-ketoacid dehydrogenase kinase, N-terminal domain [69012] (2 families)
   automatically mapped to Pfam PF10436

5. Family a.29.5.1: alpha-ketoacid dehydrogenase kinase, N-terminal domain [69013] (3 proteins)

6. Protein Pyruvate dehydrogenase kinase [69016] (2 species)

7. Species Norway rat (Rattus norvegicus), isozyme 2 [TaxId:10116] [69017] (1 PDB entry)

8. Domain d1jm6b1: 1jm6 B:1002-1169 [66878]
   Other proteins in same PDB: d1jm6a2, d1jm6b2
   complexed with adp, mg

Details for d1jm6b1

PDB Entry: 1jm6, 2.5 Å

PDB Description: Pyruvate dehydrogenase kinase, isozyme 2, containing ADP

PDB Compounds: (B:) Pyruvate dehydrogenase kinase, isozyme 2

SCOPe Domain Sequences for d1jm6b1:

Sequence, based on SEQRES records:

>d1jm6b1 a.29.5.1 (B:1002-1169) Pyruvate dehydrogenase kinase {Norway rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
naslagapkyiehfskfspsplsmkqfldfgssnacektsftflrqelpvrlanimkein
llpdrvlstpsvqlvqswyvqslldimefldkdpedhrtlsqftdalvtirnrhndvvpt
maqgvleykdtygddpvsnqniqyfldrfylsrisirmlinqhtlifd

Sequence, based on observed residues (ATOM records):

>d1jm6b1 a.29.5.1 (B:1002-1169) Pyruvate dehydrogenase kinase {Norway rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
naslagapkyiehfskfspsplsmkqfldfgacektsftflrqelpvrlanimkeinllp
drvlstpsvqlvqswyvqslldimefldkdpedhrtlsqftdalvtirnrhndvvptmaq
gvleyqniqyfldrfylsrisirmlinqhtlifd

Timeline for d1jm6b1:

• d1jm6b1 first appeared in SCOP 1.59
  
• d1jm6b1 appears in SCOPe 2.06
  
• d1jm6b1 appears in the current release, SCOPe 2.08