Lineage for d1jfql1 (1jfq L:1-108)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 450778Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 450779Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 450780Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (27 proteins)
  6. 451612Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 452039Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (162 PDB entries)
  8. 452076Domain d1jfql1: 1jfq L:1-108 [66648]
    Other proteins in same PDB: d1jfqh1, d1jfqh2, d1jfql2
    part of Fab 36-71

Details for d1jfql1

PDB Entry: 1jfq (more details), 1.9 Å

PDB Description: antigen-binding fragment of the murine anti-phenylarsonate antibody 36-71, "fab 36-71"

SCOP Domain Sequences for d1jfql1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1jfql1 b.1.1.1 (L:1-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
diqmtqipsslsaslgdrvsiscrasqdinnflnwyqqkpdgtiklliyftsrsqsgvps
rfsgsgsgtdysltisnleqediatyfcqqgnalprtfgggtkleikr

SCOP Domain Coordinates for d1jfql1:

Click to download the PDB-style file with coordinates for d1jfql1.
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Timeline for d1jfql1:

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Domains from same chain:
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d1jfql2