SCOPe 2.05: Domain d1h80b_: 1h80 B:

Lineage for d1h80b_ (1h80 B:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.1: Pectin lyase-like [51126] (12 families)
   superhelix turns are made of 3 strands each

5. Family b.80.1.8: iota-carrageenase [69333] (1 protein)
   this is a repeat family; one repeat unit is 1h80 A:181-215 found in domain

6. Protein iota-carrageenase [69334] (1 species)

7. Species Alteromonas sp., atcc 43554 [TaxId:232] [69335] (2 PDB entries)

8. Domain d1h80b_: 1h80 B: [65715]
   complexed with ca, cl, gol, na

Details for d1h80b_

PDB Entry: 1h80, 1.6 Å

PDB Description: 1,3-alpha-1,4-beta-d-galactose-4-sulfate- 3,6-anhydro-d-galactose-2- sulfate 4 galactohydrolase

PDB Compounds: (B:) iota-carrageenase

SCOPe Domain Sequences for d1h80b_:

Sequence, based on SEQRES records:

>d1h80b_ b.80.1.8 (B:) iota-carrageenase {Alteromonas sp., atcc 43554 [TaxId: 232]}
vspktykdadfyvaptqqdvnydlvddfgangndtsddsnalqrainaisrkpnggtlli
pngtyhflgiqmksnvhirvesdviikptwngdgknhrlfevgvnnivrnfsfqglgngf
lvdfkdsrdknlavfklgdvrnykisnftiddnktifasilvdvterngrlhwsrngiie
rikqnnalfgygliqtygadnilfrnlhseggialrmetdnllmknykqggirnifadni
rcskglaavmfgphfmkngdvqvtnvssvscgsavrsdsgfvelfsptdevhtrqswkqa
vesklgrgcaqtpyargnggtrwaarvtqkdacldkakleygiepgsfgtvkvfdvtarf
gynadlkqdqldyfstsnpmckrvclptkeqwskqgqiyigpslaavidttpetskydyd
vktfnvkrinfpvnshktidtntessrvcnyygmsecsssrwer

Sequence, based on observed residues (ATOM records):

>d1h80b_ b.80.1.8 (B:) iota-carrageenase {Alteromonas sp., atcc 43554 [TaxId: 232]}
vspktykdadfyvaptqqdvnydlvddfgangndtsddsnalqrainaisrkpnggtlli
pngtyhflgiqmksnvhirvesdviikptwngdgknhrlfevgvnnivrnfsfqglgngf
lvdfkdsrdknlavfklgdvrnykisnftiddnktifasilvdvterngrlhwsrngiie
rikqnnalfgygliqtygadnilfrnlhseggialrmetdnllmknykqggirnifadni
rcskglaavmfgphfmkngdvqvtnvssvscgsavrsdsgfvelfgcaqtarvtqkdacl
dkakleygiepgsfgtvkvfdvtarfgynadlkqdqldyfstsnpmckrvclptkeqwsk
qgqiyigpslaavidttpetskydydvktfnvkrinfpvnshktidtntessrvcnyygm
secsssrwer

Timeline for d1h80b_:

• d1h80b_ first appeared in SCOP 1.59
  
• d1h80b_ appears in SCOPe 2.04
  
• d1h80b_ appears in SCOPe 2.06
  
• d1h80b_ appears in the current release, SCOPe 2.08