Lineage for d1gv1b1 (1gv1 B:1-142)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2449371Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2449372Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2452663Family c.2.1.5: LDH N-terminal domain-like [51848] (9 proteins)
  6. 2453110Protein Malate dehydrogenase [51849] (13 species)
  7. 2453123Species Chlorobium vibrioforme [TaxId:1098] [69417] (2 PDB entries)
  8. 2453129Domain d1gv1b1: 1gv1 B:1-142 [65600]
    Other proteins in same PDB: d1gv1a2, d1gv1b2, d1gv1c2, d1gv1d2

Details for d1gv1b1

PDB Entry: 1gv1 (more details), 2.5 Å

PDB Description: structural basis for thermophilic protein stability: structures of thermophilic and mesophilic malate dehydrogenases
PDB Compounds: (B:) malate dehydrogenase

SCOPe Domain Sequences for d1gv1b1:

Sequence, based on SEQRES records: (download)

>d1gv1b1 c.2.1.5 (B:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}
mkitvigagnvgattafriadkklarelvlldvvegipqgkgldmyetgpvglfdtkitg
sndyadtadsdiviitaglprkpgmtredllmknagivkevtdnimkhsknpiiivvsnp
ldimthvawvrsglpkervigm

Sequence, based on observed residues (ATOM records): (download)

>d1gv1b1 c.2.1.5 (B:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}
mkitvigagnvgattafriadkklarelvlldvvegipqgkgldmyetgpvglfdtkitg
sndyadtadsdiviitagldllmknagivkevtdnimkhsknpiiivvsnpldimthvaw
vrsglpkervigm

SCOPe Domain Coordinates for d1gv1b1:

Click to download the PDB-style file with coordinates for d1gv1b1.
(The format of our PDB-style files is described here.)

Timeline for d1gv1b1: